RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TNPO3Q9Y5L0 923 aaKnown RBP17.08■□□□□ 0.32
NID1-202ENST00000366595 ENTPD3O75355 529 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 FARP2O94887 1054 aaPredicted RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 STAU1O95793 577 aaKnown RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 CDH3P22223 829 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 MILR1Q7Z6M3 343 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 CHPFQ8IZ52 775 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 SMYD1Q8NB12 490 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 CHST13Q8NET6 341 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 FAM81AQ8TBF8 368 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 PIF1Q9H611 641 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ADCY6O43306 1168 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ALDH9A1P49189 494 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 PREPLQ4J6C6 727 aaPredicted RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ESRP1Q6NXG1 681 aaKnown RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 STOX1Q6ZVD7 989 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ILDR2Q71H61 639 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 PIK3C3Q8NEB9 887 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ZNF398Q8TD17 642 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ACSF2Q96CM8 615 aaPredicted RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 PLEKHG4BQ96PX9 1271 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 SLC38A2Q96QD8 506 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 BBS4Q96RK4 519 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 SPATA5L1Q9BVQ7 753 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 CORO2BQ9UQ03 480 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 CAPN6Q9Y6Q1 641 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 KPNA5O15131 536 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 TMCC2O75069 709 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 KCNH1O95259 989 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 NPTXRO95502 500 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 RHOCP08134 193 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 BMPR2Q13873 1038 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 DDI2Q5TDH0 399 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 HERC6Q8IVU3 1022 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 MRPS31Q92665 395 aaKnown RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 ZHX1-C8orf76Q96EF9 292 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 B3GALT6Q96L58 329 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 CGRRF1Q99675 332 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 TMEM121Q9BTD3 319 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 TARS2Q9BW92 718 aaKnown RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 PFDN2Q9UHV9 154 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 NDUFB10O96000 172 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 JCHAINP01591 159 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 TNNI3P19429 210 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ACO1P21399 889 aaKnown RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 MYL9P24844 172 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ALDH5A1P51649 535 aaPredicted RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 ELF3P78545 371 aaPredicted RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 TSC22D1Q15714 1073 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ZNF75CPQ92670 426 aaPredicted RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 EPB41L1Q9H4G0 881 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 RAB21Q9UL25 225 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 SERPINF2P08697 491 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 FAUP35544 74 aaKnown RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 NR2C2P49116 596 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 ZNF135P52742 658 aaPredicted RBP17.07■□□□□ 0.32
NID1-202ENST00000366595 BIKQ13323 160 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 KCNMB4Q86W47 210 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 TMEM159Q96B96 161 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 PANX3Q96QZ0 392 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 PNPLA3Q9NST1 481 aa17.07■□□□□ 0.32
NID1-202ENST00000366595 H3BQF6 201 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 CHP2O43745 196 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 SERPINA1P01009 418 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 HMGCS2P54868 508 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 SKIV2LQ15477 1246 aaKnown RBP17.06■□□□□ 0.32
NID1-202ENST00000366595 PYDC2Q56P42 97 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 MOXD1Q6UVY6 613 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 A0A096LPK6 155 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 A0A0X1KG70 313 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 ERN1O75460 977 aaKnown RBP17.06■□□□□ 0.32
NID1-202ENST00000366595 USP46P62068 366 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 DGCR6Q14129 220 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 GJB7Q6PEY0 223 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 SP8Q8IXZ3 490 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 LZTR1Q8N653 840 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 TRPV3Q8NET8 790 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 FBXO32Q969P5 355 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 CRYL1Q9Y2S2 319 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 WDR62O43379 1518 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 HACD1B0YJ81 288 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 BORCS5Q969J3 196 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 DCLK3Q9C098 648 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 ABCB10Q9NRK6 738 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 ABI2Q9NYB9 513 aaPredicted RBP17.06■□□□□ 0.32
NID1-202ENST00000366595 AK5Q9Y6K8 562 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 IRGMA1A4Y4 181 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 FAM205CA6NFA0 338 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 STAG3L1P0CL83 205 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 UMPSP11172 480 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 LRPAP1P30533 357 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 CAPGP40121 348 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 BNIP2Q12982 314 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 STARD3Q14849 445 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 MFSD7Q6UXD7 560 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 CYP2R1Q6VVX0 501 aa17.06■□□□□ 0.32
NID1-202ENST00000366595 TMC3Q7Z5M5 1100 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms