RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 OSTM1Q86WC4 334 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 TTC30AQ86WT1 665 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 NIPA2Q8N8Q9 360 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 ANKRD52Q8NB46 1076 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 UBA3Q8TBC4 463 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 SLC35F5Q8WV83 523 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 ALG3Q92685 438 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 KRT35Q92764 455 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 ACDQ96AP0 544 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 MS4A3Q96HJ5 214 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 LRIG1Q96JA1 1093 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 HNRNPABQ99729 332 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 FAM83CQ9BQN1 747 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 SLC4A5Q9BY07 1137 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 TRIM7Q9C029 511 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 ATXN3LQ9H3M9 355 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 DPEP3Q9H4B8 488 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 EBF3Q9H4W6 596 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 CCDC86Q9H6F5 360 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 SYNCQ9H7C4 482 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 ANKZF1Q9H8Y5 726 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 EHD2Q9NZN4 543 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 DSEQ9UL01 958 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 RAB21Q9UL25 225 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 ZNF462Q96JM2 2506 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 CCDC188H7C350 402 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 M0QZQ0 153 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 PSTPIP1O43586 416 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 ERBB2P04626 1255 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 PDGFRBP09619 1106 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 ODC1P11926 461 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 KRT3P12035 628 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 GABRR2P28476 465 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 ALDH1A3P47895 512 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 GALK1P51570 392 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 BCAT1P54687 386 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 FAM193AP78312 1265 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 CYP4F8P98187 520 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 C19orf57Q0VDD7 668 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 BST2Q10589 180 aaKnown RBP11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 LRRC38Q5VT99 294 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 DNAJB7Q7Z6W7 309 aaPredicted RBP11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 TMEM110Q86TL2 294 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 ZDHHC17Q8IUH5 632 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 ATAD1Q8NBU5 361 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 B3GALNT2Q8NCR0 500 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 PSMG2Q969U7 264 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 HSFY1Q96LI6 401 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 SLC46A2Q9BY10 475 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 PARD6BQ9BYG5 372 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 TPSD1Q9BZJ3 242 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 TASP1Q9H6P5 420 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 SMARCAL1Q9NZC9 954 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 CCL26Q9Y258 94 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 ASB3Q9Y575 518 aa11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 MUC22E2RYF6 1773 aaPredicted RBP11.69□□□□□ -0.54
CSNK1E-202ENST00000366216 TMEM131Q92545 1883 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 CYSRT1A8MQ03 144 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 ARSAP15289 507 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 PTPN1P18031 435 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 TYMPP19971 482 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 MCM3P25205 808 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 PCSK1P29120 753 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 TIE1P35590 1138 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 SCNN1AP37088 669 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 ACADSBP45954 432 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 RPL7AP62424 266 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 PDE4CQ08493 712 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 BRD3Q15059 726 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 PPP2R5EQ16537 467 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 SEL1L2Q5TEA6 688 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 WDR93Q6P2C0 686 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 TMEM150AQ86TG1 271 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 METTL23Q86XA0 190 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 RHOT1Q8IXI2 618 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 TSTD1Q8NFU3 115 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 EXOC4Q96A65 974 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 MCEEQ96PE7 176 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 P2RY13Q9BPV8 354 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 FAM49BQ9NUQ9 324 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 ARGLU1Q9NWB6 273 aaPredicted RBP11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 DDX43Q9NXZ2 648 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 TJP2Q9UDY2 1190 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 CDH9Q9ULB4 789 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 MYLKQ15746 1914 aa11.68□□□□□ -0.54
CSNK1E-202ENST00000366216 HECTD1Q9ULT8 2610 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 MTMR11A4FU01 709 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 E5RJQ4 531 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 GOLGA8SH3BPF8 625 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 TNFRSF10BO14763 440 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 XPO1O14980 1071 aaKnown RBP11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 HCRTO43612 131 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 OAZ2O95190 189 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 GJB6O95452 261 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 FGGP02679 453 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 RHOXF2BP0C7M4 288 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 CCDC130P13994 396 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 HNRNPLP14866 589 aaKnown RBP eCLIP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms