RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 E9PBE3 544 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 WNT7AO00755 349 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 KLHL41O60662 606 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 GRM5P41594 1212 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 BLVRAP53004 296 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 NCKAP1LP55160 1127 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 RGL4Q8IZJ4 473 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 VPS50Q96JG6 964 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 TM6SF2Q9BZW4 377 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 DNAJC18Q9H819 358 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 GOLGA2P5Q9HBQ8 144 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 CCT8L1PA6NM43 557 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 TBC1D4O60343 1298 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 POLR2LP62875 67 aaKnown RBP18.98■□□□□ 0.63
CLIP2-202ENST00000361545 NLRP9Q7RTR0 991 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 NECAB2Q7Z6G3 386 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 ANKRD52Q8NB46 1076 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 TNIP2Q8NFZ5 429 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 CARNS1A5YM72 827 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 SLC9A3R1O14745 358 aaPredicted RBP18.97■□□□□ 0.63
CLIP2-202ENST00000361545 CYP2A7P20853 494 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 GP5P40197 560 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 KCNA10Q16322 511 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 BTBD7Q9P203 1132 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 NAALADL1Q9UQQ1 740 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 HACD1B0YJ81 288 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 CXCL14O95715 111 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 ASGR1P07306 291 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 OR56A5P0C7T3 313 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 COL9A3Q14050 684 aaPredicted RBP18.97■□□□□ 0.63
CLIP2-202ENST00000361545 NR6A1Q15406 480 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 KBTBD12Q3ZCT8 623 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 MAGED4Q96JG8 741 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 RMND5AQ9H871 391 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 TAS2R13Q9NYV9 303 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 CRYL1Q9Y2S2 319 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 TREHO43280 583 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 BUD23O43709 281 aaKnown RBP18.97■□□□□ 0.63
CLIP2-202ENST00000361545 ZSCAN5DPP0CG00 497 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 FMO4P31512 558 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 OR1D2P34982 312 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 ALDH9A1P49189 494 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 BTN2A2Q8WVV5 523 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 TSC22D3Q99576 134 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 OMDQ99983 421 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 EIF2AQ9BY44 585 aaKnown RBP18.97■□□□□ 0.63
CLIP2-202ENST00000361545 VAV3Q9UKW4 847 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 TBL1XO60907 577 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 ZBTB48P10074 688 aaPredicted RBP18.97■□□□□ 0.63
CLIP2-202ENST00000361545 KCNMA1Q12791 1236 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 N4BP2L1Q5TBK1 243 aaPredicted RBP18.97■□□□□ 0.63
CLIP2-202ENST00000361545 TMBIM4Q9HC24 238 aa18.97■□□□□ 0.63
CLIP2-202ENST00000361545 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
CLIP2-202ENST00000361545 DYRK3O43781 588 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 MTSS1LQ765P7 747 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 SH3BP5LQ7L8J4 393 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 TDRD5Q8NAT2 981 aaKnown RBP18.96■□□□□ 0.63
CLIP2-202ENST00000361545 ANKRD7Q92527 254 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 IKZF4Q9H2S9 585 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 PADI4Q9UM07 663 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 SMIM35A0A1B0GVV1 85 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 NR5A2O00482 541 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 FGRP09769 529 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 TRAPPC5Q8IUR0 188 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 ZNF143P52747 638 aaPredicted RBP18.96■□□□□ 0.63
CLIP2-202ENST00000361545 ATP13A4Q4VNC1 1196 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 PLPP4Q5VZY2 271 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 MARK2Q7KZI7 788 aaKnown RBP18.96■□□□□ 0.63
CLIP2-202ENST00000361545 SUGP1Q8IWZ8 645 aaKnown RBP18.96■□□□□ 0.63
CLIP2-202ENST00000361545 STX19Q8N4C7 294 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 MAGEB18Q96M61 343 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 NDUFV1P49821 464 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 SLC16A1P53985 500 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 TARBP2Q15633 366 aaKnown RBP18.96■□□□□ 0.63
CLIP2-202ENST00000361545 ZACNQ401N2 412 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 APPL1Q9UKG1 709 aa18.96■□□□□ 0.63
CLIP2-202ENST00000361545 EPHB6O15197 1021 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 SMAD3P84022 425 aaKnown RBP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 ATP6AP1LQ52LC2 224 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 SERPINA13PQ6UXR4 307 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 USP45Q70EL2 814 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 KATNAL2Q8IYT4 538 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 RSPH1Q8WYR4 309 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 VAT1Q99536 393 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 SNRNP25Q9BV90 132 aaKnown RBP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 MIEF1Q9NQG6 463 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 FGF10O15520 208 aaPredicted RBP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 SLC2A4P14672 509 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 PPM1AP35813 382 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 CD86P42081 329 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 CREMQ03060 361 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 NFYCQ13952 458 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 DPYSL3Q14195 570 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 C16orf87Q6PH81 154 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 ZNF438Q7Z4V0 828 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 FAM71AQ8IYT1 594 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 CASP10Q92851 521 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 CASZ1Q86V15 1759 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 IGF2BP3O00425 579 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 ZBTB22O15209 634 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms