RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 TDRPQ86YL5 185 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 SPATA16Q9BXB7 569 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 DGCR6LQ9BY27 220 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 MAN1C1Q9NR34 630 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 STK39Q9UEW8 545 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 ASTN2O75129 1339 aaPredicted RBP14.25□□□□□ -0.13
SMC5-201ENST00000361138 TMEM150BA6NC51 233 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 TRUB2O95900 331 aaKnown RBP14.25□□□□□ -0.13
SMC5-201ENST00000361138 MRNIPQ6NTE8 343 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 C10orf82Q8WW14 230 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 CAPSLQ8WWF8 208 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 EBF3Q9H4W6 596 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 PIM2Q9P1W9 311 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 POLLQ9UGP5 575 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 PLLPQ9Y342 182 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 LINC00854A0A1B0GVQ3 168 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 PSMD12O00232 456 aaPredicted RBP14.24□□□□□ -0.13
SMC5-201ENST00000361138 VWA5AO00534 786 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 TRMUO75648 421 aaKnown RBP14.24□□□□□ -0.13
SMC5-201ENST00000361138 PSMD10O75832 226 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 PIK3R1P27986 724 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 ATP6V1E1P36543 226 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 GRIA3P42263 894 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 CD151P48509 253 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 BCAT1P54687 386 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 TRAF3Q13114 568 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 ADGRD1Q6QNK2 874 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 C8orf59Q8N0T1 100 aaPredicted RBP14.24□□□□□ -0.13
SMC5-201ENST00000361138 SAMD3Q8N6K7 520 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 DISP2A7MBM2 1401 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 CCNA2P20248 432 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 CHRM3P20309 590 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 BFSP2Q13515 415 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 CCDC142Q17RM4 750 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 FNBP1LQ5T0N5 605 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 RCN3Q96D15 328 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 PNPOQ9NVS9 261 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 STMN3Q9NZ72 180 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 NR2E1Q9Y466 385 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 C5orf58C9J3I9 102 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 STAG3L1P0CL83 205 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 TPH1P17752 444 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 AMPD1P23109 780 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 ETFBP38117 255 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 RAB27AP51159 221 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 USP46P62068 366 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 VAC14Q08AM6 782 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 ANO7Q6IWH7 933 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 NIPA1Q7RTP0 329 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 POLR1BQ9H9Y6 1135 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 PTTG2Q9NZH5 202 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 TRMT6Q9UJA5 497 aaKnown RBP14.24□□□□□ -0.13
SMC5-201ENST00000361138 TMEM59LQ9UK28 342 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 TPRKBQ9Y3C4 175 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 NCAM2O15394 837 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 HS6ST1O60243 411 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 CREB1P16220 341 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 CDH17Q12864 832 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 TOP3AQ13472 1001 aaPredicted RBP14.24□□□□□ -0.13
SMC5-201ENST00000361138 KCNT2Q6UVM3 1135 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 STK32CQ86UX6 486 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 HPS6Q86YV9 775 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 MAGEE2Q8TD90 523 aaPredicted RBP14.24□□□□□ -0.13
SMC5-201ENST00000361138 SLC44A1Q8WWI5 657 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 DDIT4Q9NX09 232 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 DNAJC28Q9NX36 388 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 ANAPC2Q9UJX6 822 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 WASF2Q9Y6W5 498 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 MED26O95402 600 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 ASMTLO95671 621 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 PGM5Q15124 567 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 C6orf52Q5T4I8 152 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 TIGD7Q6NT04 549 aaPredicted RBP14.24□□□□□ -0.13
SMC5-201ENST00000361138 BNIPLQ7Z465 357 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 NANOGNBQ7Z5D8 188 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 STX19Q8N4C7 294 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 RAD21L1Q9H4I0 556 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 TRIM45Q9H8W5 580 aaPredicted RBP14.24□□□□□ -0.13
SMC5-201ENST00000361138 UBP1Q9NZI7 540 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 TSPAN16Q9UKR8 245 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 PLA2G4CQ9UP65 541 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 USP20Q9Y2K6 914 aa14.24□□□□□ -0.13
SMC5-201ENST00000361138 HIST1H2AGP0C0S8 130 aaPredicted RBP14.23□□□□□ -0.13
SMC5-201ENST00000361138 ALOX12P18054 663 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 HIST1H2ADP20671 130 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 NOMO3P69849 1222 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 CDC42EP1Q00587 391 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 DCAF4L1Q3SXM0 396 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 HIST1H2AHQ96KK5 128 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 ZDHHC15Q96MV8 337 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 HIST1H2AJQ99878 128 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 H2AFJQ9BTM1 129 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 APOL5Q9BWW9 433 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 UGT2B28Q9BY64 529 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 RAD54BQ9Y620 910 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 AFDNP55196 1824 aaKnown RBP14.23□□□□□ -0.13
SMC5-201ENST00000361138 GAKO14976 1311 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 ASB14A6NK59 587 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 VPS4BO75351 444 aa14.23□□□□□ -0.13
SMC5-201ENST00000361138 CRHR1P34998 444 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms