RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PNPLA6Q8IY17 1366 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 CLCC1Q96S66 551 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 UGT2B28Q9BY64 529 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 SPG21Q9NZD8 308 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ITGB1BP2Q9UKP3 347 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 HMGCRP04035 888 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 TSPAN19P0C672 248 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 XRCC4Q13426 336 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ZNF248Q8NDW4 579 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ZNF232Q9UNY5 417 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ATMINO43313 823 aaPredicted RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 RGS14O43566 566 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ATG7O95352 703 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 MLH1P40692 756 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ATP12AP54707 1039 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ADIGQ0VDE8 80 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 GRM3Q14832 879 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ENKURQ8TC29 256 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 AP3S1Q92572 193 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 FAM120BQ96EK7 910 aaKnown RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 SETBP1Q9Y6X0 1596 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 CNTNAP5Q8WYK1 1306 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 FAM20BO75063 409 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 COX7A2P14406 83 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 ACADLP28330 430 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 TUBP50607 506 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 CDH17Q12864 832 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 PPM1LQ5SGD2 360 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 SLC24A3Q9HC58 644 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 ERI2A8K979 691 aaKnown RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 ATP6V1B1P15313 513 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 KLRC2P26717 231 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 GPR1P46091 355 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 BACE1P56817 501 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 CYP20A1Q6UW02 462 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 AADATQ8N5Z0 425 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 NBPF15Q8N660 670 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 POLR1BQ9H9Y6 1135 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 MRPL39Q9NYK5 338 aaKnown RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 MFHAS1Q9Y4C4 1052 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 AHCTF1Q8WYP5 2266 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 CYP1A1P04798 512 aaPredicted RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 PAEPP09466 180 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 RARGP13631 454 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 POU1F1P28069 291 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 FAM187BQ17R55 369 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 PLEKHA7Q6IQ23 1121 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 FBXO39Q8N4B4 442 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 UTP15Q8TED0 518 aaKnown RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 C1QBPQ07021 282 aaKnown RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 KLHL17Q6TDP4 642 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 CHAMP1Q96JM3 812 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 TSPAN18Q96SJ8 248 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 MAGEC1O60732 1142 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 POMCP01189 267 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 MAPK8P45983 427 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 SLC1A6P48664 564 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 TUFMP49411 452 aaKnown RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 GLRA4Q5JXX5 417 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 SPANXN3Q5MJ09 141 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 TMC5Q6UXY8 1006 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 NT5DC3Q86UY8 548 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 CABYRO75952 493 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 SUCOQ9UBS9 1254 aaKnown RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 PHTF1Q9UMS5 762 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 GVINP1Q7Z2Y8 2422 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 TRAV19A0A0A6YYK7 116 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 BCLAF3A2AJT9 711 aaKnown RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 GYS2P54840 703 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 OVOS1Q6IE37 1185 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 PEX5LQ8IYB4 626 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 LENG9Q96B70 501 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 THAP2Q9H0W7 228 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 MAP10Q9P2G4 905 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 PCDHGC5Q9Y5F6 944 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 NEK3P51956 506 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 BIKQ13323 160 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 KIF2BQ8N4N8 673 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 ATP13A1Q9HD20 1204 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 CCDC154A6NI56 674 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 FGFR1P11362 822 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 AKR1A1P14550 325 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 KELP23276 732 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 IL5RAQ01344 420 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 NFIL3Q16649 462 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 TXNRD3Q86VQ6 643 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 HNRNPLLQ8WVV9 542 aaKnown RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 A0A087X1B8 175 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 FOXN1O15353 648 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 KCNH1O95259 989 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 DGKAP23743 735 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 PSMD4P55036 377 aaKnown RBP9.87□□□□□ -0.83
CUX1-203ENST00000360264 MZT2AQ6P582 158 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 GMCL1Q96IK5 515 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 CATSPER2Q96P56 530 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 DCLRE1BQ9H816 532 aa9.87□□□□□ -0.83
CUX1-203ENST00000360264 CES2O00748 559 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 TPP2P29144 1249 aaPredicted RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 PABPC1LQ4VXU2 614 aaKnown RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 OR8H2Q8N162 312 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms