RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 TRIM17Q9Y577 477 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 BHMG1C9JSJ3 638 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 COX4I1P13073 169 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PHKA2P46019 1235 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 JDP2Q8WYK2 163 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 NOL11Q9H8H0 719 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 POLR1BQ9H9Y6 1135 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 HEY1Q9Y5J3 304 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CARNS1A5YM72 827 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TLR2O60603 784 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CD40LGP29965 261 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CYP4A11Q02928 519 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CYP4A22Q5TCH4 519 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SPOPLQ6IQ16 392 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PDSS2Q86YH6 399 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PLD6Q8N2A8 252 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 FBXO36Q8NEA4 188 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 RBM4BQ9BQ04 359 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 RBM4Q9BWF3 364 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SYTL2Q9HCH5 934 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 GIMAP4Q9NUV9 329 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 FAIMQ9NVQ4 179 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 AP1M2Q9Y6Q5 423 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TAF4O00268 1085 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 AVILO75366 819 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 ATL1Q8WXF7 558 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 DEPDC7Q96QD5 511 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 NOCTQ9UK39 431 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 MON2Q7Z3U7 1717 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SNX2O60749 519 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 KRT36O76013 467 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PCSK1P29120 753 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 DNAJB13P59910 316 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 MAPRE1Q15691 268 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TADA1Q96BN2 335 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 NT5C1AQ9BXI3 368 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 DNAJC16Q9Y2G8 782 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 DHRS12A0PJE2 317 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CHRNA2Q15822 529 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 STRIP1Q5VSL9 837 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 RBM44Q6ZP01 1051 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SP8Q8IXZ3 490 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 IPCEF1Q8WWN9 437 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 RHOJQ9H4E5 214 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SP140LQ9H930 580 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 ATP6V1HQ9UI12 483 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TSPAN9O75954 239 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TRIM49P0CI25 452 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TRIM49CP0CI26 452 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TPSB2P20231 275 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF143P52747 638 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TPSAB1Q15661 275 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PGBD4Q96DM1 585 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 KLHL8Q9P2G9 620 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SALL4Q9UJQ4 1053 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 HLA-DRAP01903 254 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TP53BP2Q13625 1128 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 NCF4Q15080 339 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PID1Q7Z2X4 250 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 DNAAF5Q86Y56 855 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 ADNPQ9H2P0 1102 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 MBD2Q9UBB5 411 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 GLS2Q9UI32 602 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 NFASCO94856 1347 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PSMD12O00232 456 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 COBLO75128 1261 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PEPDP12955 493 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PTGER2P43116 358 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 BST1Q10588 318 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 FAM228AQ86W67 206 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PIGBQ92521 554 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PNMA5Q96PV4 448 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 EBNA1BP2Q99848 306 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CORO2BQ9UQ03 480 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SNX4O95219 450 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 ERCC2P18074 760 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 DDR2Q16832 855 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PLA2G4FQ68DD2 849 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TRAF7Q6Q0C0 670 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CHPT1Q8WUD6 406 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 AP3S1Q92572 193 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SNX27Q96L92 541 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TDP2O95551 362 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PYGLP06737 847 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PDPK2PQ6A1A2 396 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CDH19Q9H159 772 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PCDHA2Q9Y5H9 948 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TEX264Q9Y6I9 313 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CCNFP41002 786 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 RGS4P49798 205 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 POU4F1Q01851 419 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 DGKDQ16760 1214 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SHQ1Q6PI26 577 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MAP4K3Q8IVH8 894 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 TRIM45Q9H8W5 580 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 NPAP1Q9NZP6 1156 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 FAM196BA6NMK8 535 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 BCAS2O75934 225 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 C6orf222P0C671 652 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ITGA2P17301 1181 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms