RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ZFRQ96KR1 1074 aaKnown RBP17.56■□□□□ 0.4
TPM1-205ENST00000357980 SLC22A12Q96S37 553 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 KLF16Q9BXK1 252 aaPredicted RBP17.56■□□□□ 0.4
TPM1-205ENST00000357980 PRDM12Q9H4Q4 367 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 CATSPERBQ9H7T0 1116 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 PPARGC1AQ9UBK2 798 aaKnown RBP17.56■□□□□ 0.4
TPM1-205ENST00000357980 VANGL2Q9ULK5 521 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 SHROOM3Q8TF72 1996 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.56■□□□□ 0.4
TPM1-205ENST00000357980 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.56■□□□□ 0.4
TPM1-205ENST00000357980 WASH4PA8MWX3 477 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 PPP1R12AO14974 1030 aaPredicted RBP17.56■□□□□ 0.4
TPM1-205ENST00000357980 NCAM2O15394 837 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 CCL16O15467 120 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 STC2O76061 302 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 EPCAMP16422 314 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 GABRR2P28476 465 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 HOXA9P31269 272 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 CAV1Q03135 178 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 HIBCHQ6NVY1 386 aaPredicted RBP17.56■□□□□ 0.4
TPM1-205ENST00000357980 TMC3Q7Z5M5 1100 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 NLRP14Q86W24 1093 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 RTL3Q8N8U3 475 aaKnown RBP17.56■□□□□ 0.4
TPM1-205ENST00000357980 LRRC45Q96CN5 670 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 TXLNGYQ9BZA5 131 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 NOTCH4Q99466 2003 aa17.56■□□□□ 0.4
TPM1-205ENST00000357980 TNRC18O15417 2968 aaPredicted RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 NYNRINQ9P2P1 1898 aaKnown RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 CLUHO75153 1309 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 HELZP42694 1942 aaKnown RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 NRG2O14511 850 aaPredicted RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 RFPL2O75678 378 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 HSPA9P38646 679 aaKnown RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 IRAK1P51617 712 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 EPHA5P54756 1037 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 RNASEH2BQ5TBB1 312 aaKnown RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 RAP1GAP2Q684P5 730 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 TXNDC8Q6A555 127 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 FBXL22Q6P050 247 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 ARHGAP12Q8IWW6 846 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 TSEN2Q8NCE0 465 aaKnown RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 HDAC11Q96DB2 347 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 NKX2-4Q9H2Z4 354 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 CERS4Q9HA82 394 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 GKN1Q9NS71 199 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 MPP6Q9NZW5 540 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 MTRF1LQ9UGC7 380 aaKnown RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 ANAPC5Q9UJX4 755 aa17.55■□□□□ 0.4
TPM1-205ENST00000357980 FARP1Q9Y4F1 1045 aaPredicted RBP17.55■□□□□ 0.4
TPM1-205ENST00000357980 GCATO75600 419 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 KLKB1P03952 638 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 HARS2P49590 506 aaKnown RBP17.54■□□□□ 0.4
TPM1-205ENST00000357980 PPIDQ08752 370 aaKnown RBP17.54■□□□□ 0.4
TPM1-205ENST00000357980 FAM133BQ5BKY9 247 aaKnown RBP17.54■□□□□ 0.4
TPM1-205ENST00000357980 AFMIDQ63HM1 303 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 HEATR6Q6AI08 1181 aaKnown RBP17.54■□□□□ 0.4
TPM1-205ENST00000357980 LRRC31Q6UY01 552 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 LZTR1Q8N653 840 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 HTR3CQ8WXA8 447 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 IGSF8Q969P0 613 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 AZIN2Q96A70 460 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 CYP2S1Q96SQ9 504 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 CORO1BQ9BR76 489 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 ZYG11BQ9C0D3 744 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 TRPC7Q9HCX4 862 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 ASAH2Q9NR71 780 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 NDFIP2Q9NV92 336 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 PAK5Q9P286 719 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 ZNF212Q9UDV6 495 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 TPX2Q9ULW0 747 aaKnown RBP17.54■□□□□ 0.4
TPM1-205ENST00000357980 C5orf60A6NFR6 353 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 DRGXA6NNA5 263 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 H0YGN5 161 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 ACSL4O60488 711 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 PPFIA2O75334 1257 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 MX2P20592 715 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 CDC25CP30307 473 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 GARSP41250 739 aaKnown RBP17.54■□□□□ 0.4
TPM1-205ENST00000357980 CYP4F8P98187 520 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 MORF4L2Q15014 288 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 RAB30Q15771 203 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 CHSY1Q86X52 802 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 MRPS31Q92665 395 aaKnown RBP17.54■□□□□ 0.4
TPM1-205ENST00000357980 WBP2Q969T9 261 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 MYEOVQ96EZ4 313 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 P2RY11Q96G91 374 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 CELF6Q96J87 481 aaKnown RBP17.54■□□□□ 0.4
TPM1-205ENST00000357980 BRD8Q9H0E9 1235 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 VIPAS39Q9H9C1 493 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 HCFC1R1Q9NWW0 138 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 MSRAQ9UJ68 235 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 HPCAL4Q9UM19 191 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 SHOC2Q9UQ13 582 aa17.54■□□□□ 0.4
TPM1-205ENST00000357980 CHD5Q8TDI0 1954 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 GOLGA6L7A0A1B0GV03 622 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 PER2O15055 1255 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 MBL2P11226 248 aaPredicted RBP17.53■□□□□ 0.4
TPM1-205ENST00000357980 RHOQP17081 205 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 TACR2P21452 398 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms