RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CEP41Q9BYV8 373 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 C6orf62Q9GZU0 229 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 BPIFA1Q9NP55 256 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 RWDD2AQ9UIY3 292 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 FZD1Q9UP38 647 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 SNCAIPQ9Y6H5 919 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 SCAF11Q99590 1463 aaKnown RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 PDS5AQ29RF7 1337 aaKnown RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 BCLAF3A2AJT9 711 aaKnown RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 DYTNA2CJ06 578 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 EIF3DO15371 548 aaKnown RBP eCLIP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 DDNO94850 711 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 FARP2O94887 1054 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 SLC25A27O95847 323 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 MAT2AP31153 395 aaKnown RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 ADD2P35612 726 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 CLCN3P51790 818 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 GEMP55040 296 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 RAB2AP61019 212 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 BNIP1Q12981 228 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 PPIL2Q13356 520 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF846Q147U1 533 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 ACAP1Q15027 740 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 UGP2Q16851 508 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 EFHC1Q5JVL4 640 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 FAM91A1Q658Y4 838 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 EEF1AKMT1Q8WVE0 214 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 SAT2Q96F10 170 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 SEC16BQ96JE7 1060 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 KLHL32Q96NJ5 620 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 BRF2Q9HAW0 419 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 CMTM6Q9NX76 183 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 PFASO15067 1338 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 IFT140Q96RY7 1462 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 USP27XA6NNY8 438 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 SEC22BO75396 215 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 NR0B1P51843 470 aaKnown RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 PPP2R2BQ00005 443 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 RAB39AQ14964 217 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 FAM83EQ2M2I3 478 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 PYHIN1Q6K0P9 492 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 GPAT2Q6NUI2 795 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 SLC4A11Q8NBS3 891 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 OR52L1Q8NGH7 329 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 OR5M3Q8NGP4 307 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 OR14C36Q8NHC7 312 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 ARHGEF26Q96DR7 871 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 FAM120BQ96EK7 910 aaKnown RBP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 AIFM3Q96NN9 605 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 THAP9Q9H5L6 903 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.92□□□□□ -1.46
BRCA1-203ENST00000357654 ZSWIM5Q9P217 1185 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 IQGAP2Q13576 1575 aa5.92□□□□□ -1.46
BRCA1-203ENST00000357654 ANKRD65E5RJM6 399 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 MYL12BO14950 172 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 RPA1P27694 616 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 MTTPP55157 894 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CDKL1Q00532 357 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 NR6A1Q15406 480 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 KNOP1Q1ED39 458 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CDH24Q86UP0 819 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CLEC10AQ8IUN9 316 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PROX1Q92786 737 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TMEM47Q9BQJ4 181 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 MTG1Q9BT17 334 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 FOXP1Q9H334 677 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CDH9Q9ULB4 789 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CARMIL3Q8ND23 1372 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 C19orf81C9J6K1 198 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 NEDD8-MDP1E9PL57 170 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TRIM24O15164 1050 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CCDC22O60826 627 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CNOT3O75175 753 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ERAL1O75616 437 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 OR5F1O95221 314 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 MMP1P03956 469 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 GSTM5P46439 218 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 IRX1P78414 480 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 EXOSC10Q01780 885 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TAP1Q03518 808 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PTK7Q13308 1070 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CSHL1Q14406 222 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ZYG11AQ6WRX3 759 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF621Q6ZSS3 439 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 GPR156Q8NFN8 814 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 GTF3C2Q8WUA4 911 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PIGBQ92521 554 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 STRA6Q9BX79 667 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 GLIS2Q9BZE0 524 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PCDHB5Q9Y5E4 795 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 NOS1APO75052 506 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 IL18RAPO95256 599 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 FMO4P31512 558 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CSTF2P33240 577 aaKnown RBP eCLIP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 GNALP38405 381 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 AP3M2P53677 418 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CYLC2Q14093 348 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 HLFQ16534 295 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 SLFNL1Q499Z3 407 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CYP27C1Q4G0S4 372 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms