RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 BCAS2O75934 225 aaPredicted RBP6.71□□□□□ -1.33
TRIM38-201ENST00000357085 BBOX1O75936 387 aa6.71□□□□□ -1.33
TRIM38-201ENST00000357085 AKR1B1P15121 316 aa6.71□□□□□ -1.33
TRIM38-201ENST00000357085 NEDD8Q15843 81 aa6.71□□□□□ -1.33
TRIM38-201ENST00000357085 MAGEB10Q96LZ2 347 aaPredicted RBP6.71□□□□□ -1.33
TRIM38-201ENST00000357085 PHF12Q96QT6 1004 aa6.71□□□□□ -1.33
TRIM38-201ENST00000357085 KRT82Q9NSB4 513 aa6.71□□□□□ -1.33
TRIM38-201ENST00000357085 ST14Q9Y5Y6 855 aa6.71□□□□□ -1.33
TRIM38-201ENST00000357085 GRXCR2A6NFK2 248 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 TTLL13PA6NNM8 815 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 PDZK1P1A8MUH7 402 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 H3BSA7 217 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 SPTLC1O15269 473 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 PTTG1O95997 202 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 MAD2L1Q13257 205 aaPredicted RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 CERKLQ49MI3 558 aaPredicted RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 SLC20A1Q8WUM9 679 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 DNAJC19Q96DA6 116 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 CENPNQ96H22 339 aaPredicted RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 MTFR1LQ9H019 292 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 MARCH7Q9H992 704 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 DNAJC16Q9Y2G8 782 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 ITGB4P16144 1822 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 LOC110117498-PIK3R3F6TDL0 507 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 RAD51BO15315 384 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 GM2AP17900 193 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 RRM1P23921 792 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 CLK1P49759 484 aaKnown RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 KCNK10P57789 538 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 ARHGEF16Q5VV41 709 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 DHRSXQ8N5I4 330 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 PPHLN1Q8NEY8 458 aaKnown RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 GAB3Q8WWW8 586 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 PIK3R3Q92569 461 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 ARPC5LQ9BPX5 153 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 FEM1BQ9UK73 627 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 UBDO15205 165 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 HDAC3O15379 428 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 MSH3P20585 1137 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 CHRNB3Q05901 458 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 KCNT1Q5JUK3 1230 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 RNASEH2BQ5TBB1 312 aaKnown RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 BSPRYQ5W0U4 402 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 HOPXQ9BPY8 73 aaPredicted RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 A0A087X1B8 175 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 FOXN3O00409 490 aaPredicted RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 PTGS2P35354 604 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 WDR4P57081 412 aaKnown RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 CTC1Q2NKJ3 1217 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 NAPEPLDQ6IQ20 393 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 RNF19BQ6ZMZ0 732 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 PSTKQ8IV42 348 aaKnown RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 GLMNQ92990 594 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 NCLNQ969V3 563 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 TMEM117Q9H0C3 514 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 SEC14L4Q9UDX3 406 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 CORO2BQ9UQ03 480 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 GNEQ9Y223 722 aaKnown RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 ASTN1O14525 1302 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 FUOMA2VDF0 154 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 AQP12BA6NM10 295 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 PSMD12O00232 456 aaPredicted RBP6.71□□□□□ -1.34
TRIM38-201ENST00000357085 MEIS1O00470 390 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 MFN2O95140 757 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 BMP3P12645 472 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 CDC42EP1Q00587 391 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 COG2Q14746 738 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 LRRC8DQ7L1W4 858 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 ARMCX2Q7L311 632 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 NT5DC4Q86YG4 428 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 AQP12AQ8IXF9 295 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 FLCNQ8NFG4 579 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 MTERF3Q96E29 417 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 WRNIP1Q96S55 665 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 PRRG3Q9BZD7 231 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 PI4KBQ9UBF8 816 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 RABL2BQ9UNT1 228 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 RAP2CQ9Y3L5 183 aa6.71□□□□□ -1.34
TRIM38-201ENST00000357085 HPRP00739 348 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 LTKP29376 864 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 GP5P40197 560 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 IST1P53990 364 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 AIF1P55008 147 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 OGFRL1Q5TC84 451 aaPredicted RBP6.7□□□□□ -1.34
TRIM38-201ENST00000357085 TRIM54Q9BYV2 358 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 TCN1P20061 433 aaPredicted RBP6.7□□□□□ -1.34
TRIM38-201ENST00000357085 IFNA8P32881 189 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 IL12RB1P42701 662 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 MARCKSL1P49006 195 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 CSE1LP55060 971 aaKnown RBP6.7□□□□□ -1.34
TRIM38-201ENST00000357085 SLC18A2Q05940 514 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 TNK2Q07912 1038 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 MMRN1Q13201 1228 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 C15orf59Q2T9L4 293 aaPredicted RBP6.7□□□□□ -1.34
TRIM38-201ENST00000357085 TRUB1Q8WWH5 349 aaKnown RBP6.7□□□□□ -1.34
TRIM38-201ENST00000357085 PROX1Q92786 737 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 CYP3A43Q9HB55 503 aa6.7□□□□□ -1.34
TRIM38-201ENST00000357085 PCDH12Q9NPG4 1184 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms