RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 AHCYL1O43865 530 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 PIGNO95427 931 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 EGFRP00533 1210 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 RHOCP08134 193 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 MYL4P12829 197 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 DRD4P21917 467 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 AMPD1P23109 780 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 MIPP30301 263 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 PKNOX1P55347 436 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 RHOAP61586 193 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 EFEMP1Q12805 493 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 ZNF284Q2VY69 593 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 CASP12Q6UXS9 341 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 OOSP2Q86WS3 158 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 CPB2Q96IY4 423 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 ETAA1Q9NY74 926 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 UBAP1Q9NZ09 502 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 AP3M1Q9Y2T2 418 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 PPP2R1BP30154 601 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 KCNJ2P63252 427 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 COX10Q12887 443 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 GSTA3Q16772 222 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 DGKKQ5KSL6 1271 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 ENKURQ8TC29 256 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 SYTL5Q8TDW5 730 aaPredicted RBP15.14■□□□□ 0.01
CHD4-201ENST00000357008 VAT1Q99536 393 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 APBA2Q99767 749 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 NRXN1Q9ULB1 1477 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 PCNAP12004 261 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 TSNQ15631 228 aaKnown RBP15.14■□□□□ 0.01
CHD4-201ENST00000357008 PDK4Q16654 411 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 KCNT2Q6UVM3 1135 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 LZTR1Q8N653 840 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 FAM45AQ8TCE6 357 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 SPATA2Q9UM82 520 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 CHADO15335 359 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 PDE9AO76083 593 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 MICAL2O94851 1124 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 YWHAZP63104 245 aaKnown RBP15.14■□□□□ 0.01
CHD4-201ENST00000357008 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 OTOP1Q7RTM1 612 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 METTL6Q8TCB7 284 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 CELF6Q96J87 481 aaKnown RBP15.14■□□□□ 0.01
CHD4-201ENST00000357008 RIBC2Q9H4K1 309 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 POMKQ9H5K3 350 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 MIEF1Q9NQG6 463 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 SLC12A8A0AV02 714 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 TSHRP16473 764 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 NEK3P51956 506 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 SEMA4DQ92854 862 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 NUDT12Q9BQG2 462 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 ADPRHL2Q9NX46 363 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 ANAPC2Q9UJX6 822 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 PCDHB7Q9Y5E2 793 aa15.14■□□□□ 0.01
CHD4-201ENST00000357008 A0A087X1B8 175 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 SMIM31A0A1B0GVY4 71 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 LRPAP1P30533 357 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 CBWD6Q4V339 395 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 CBWD3Q5JTY5 395 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 CBWD5Q5RIA9 395 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 RAD21L1Q9H4I0 556 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 PRDM16Q9HAZ2 1276 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 KLHL28Q9NXS3 571 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 LNPEPQ9UIQ6 1025 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 DOLKQ9UPQ8 538 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 C1orf167Q5SNV9 1468 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 VTNP04004 478 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 YY1P25490 414 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 CDC25CP30307 473 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 KPNA1P52294 538 aaPredicted RBP15.13■□□□□ 0.01
CHD4-201ENST00000357008 PRAMEF18Q5VWM3 479 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 ARMC3Q5W041 872 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 WDR60Q8WVS4 1066 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 BHMTQ93088 406 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 CLEC4MQ9H2X3 399 aaPredicted RBP15.13■□□□□ 0.01
CHD4-201ENST00000357008 COMMD3-BMI1R4GMX3 469 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 PSMD12O00232 456 aaPredicted RBP15.13■□□□□ 0.01
CHD4-201ENST00000357008 KATNA1O75449 491 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 THP07101 528 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 WDR59Q6PJI9 974 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 MARK2Q7KZI7 788 aaKnown RBP15.13■□□□□ 0.01
CHD4-201ENST00000357008 C8orf59Q8N0T1 100 aaPredicted RBP15.13■□□□□ 0.01
CHD4-201ENST00000357008 FAM237BA0A1B0GVD1 139 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 RBL1P28749 1068 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 SLC12A3P55017 1021 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 TOP3AQ13472 1001 aaPredicted RBP15.13■□□□□ 0.01
CHD4-201ENST00000357008 NRF1Q16656 503 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 CES3Q6UWW8 571 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 TMEM132CQ8N3T6 1108 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 FBXW8Q8N3Y1 598 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 XPNPEP3Q9NQH7 507 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 IL17RBQ9NRM6 502 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 VPS28Q9UK41 221 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 TMEM191CA6NGB0 347 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 ALDH1A2O94788 518 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 KDELR1P24390 212 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 SCNN1BP51168 640 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 NR1H2P55055 460 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 ZNF618Q5T7W0 954 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 ZPBP2Q6X784 338 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms