RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 DGAT1O75907 488 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 RPA3P35244 121 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ZNF846Q147U1 533 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ZNF621Q6ZSS3 439 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 HPS6Q86YV9 775 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 CD302Q8IX05 232 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 PCDH20Q8N6Y1 951 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 SEMA4AQ9H3S1 761 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 PMF1-BGLAPU3KQ54 211 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 OPLAHO14841 1288 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ZMPSTE24O75844 475 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 KCNH1O95259 989 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 FAM228BP0C875 321 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 MAGP20916 626 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 RPS6KA3P51812 740 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 POU6F1Q14863 301 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 PHACTR4Q8IZ21 702 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 PJA1Q8NG27 643 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 FBXO25Q8TCJ0 367 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ACTRT2Q8TDY3 377 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ZNF224Q9NZL3 707 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 C5orf22Q49AR2 442 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 TBATAQ96M53 351 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 MNTQ99583 582 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ACTR8Q9H981 624 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 THAP1Q9NVV9 213 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 KLHL28Q9NXS3 571 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 RSL24D1Q9UHA3 163 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 SLC24A2Q9UI40 661 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ARAP3Q8WWN8 1544 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ATF4P18848 351 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ACLYP53396 1101 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ERMARDQ5T6L9 678 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 TEKT5Q96M29 485 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 RSPH9Q9H1X1 276 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ACOT9Q9Y305 439 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 PCDHB7Q9Y5E2 793 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 F5H5T6 163 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 TRIM3O75382 744 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ARF3P61204 181 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 ARF1P84077 181 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 BROXQ5VW32 411 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 R3HCC1LQ7Z5L2 792 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 FAM20CQ8IXL6 584 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 C2orf69Q8N8R5 385 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 REXO5Q96IC2 774 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 APOPT1Q96IL0 206 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 CCDC115Q96NT0 180 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 RPRD1AQ96P16 312 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 CRISPLD1Q9H336 500 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 PDGFCQ9NRA1 345 aa11.25□□□□□ -0.61
GTF3C1-201ENST00000356183 CCDC162PA2VCL2 907 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 HNMTP50135 292 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 FBXO42Q6P3S6 717 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 TTC27Q6P3X3 843 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 CYP20A1Q6UW02 462 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 TMC3Q7Z5M5 1100 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 FAM9CQ8IZT9 166 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 HTRA1Q92743 480 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 C8orf4Q9NR00 106 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 CLN6Q9NWW5 311 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 MRPL42Q9Y6G3 142 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 TSPAN4O14817 238 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 KPNA6O60684 536 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 TMCC2O75069 709 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 TFRCP02786 760 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 PRKAR1AP10644 381 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 FGFR1P11362 822 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 RXRGP48443 463 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 PTDSS1P48651 473 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 MSLNQ13421 630 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 XKR3Q5GH77 459 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 GLRA4Q5JXX5 417 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 LIN54Q6MZP7 749 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 ZNF540Q8NDQ6 660 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 POP1Q99575 1024 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 MMADHCQ9H3L0 296 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 TMEM114B3SHH9 223 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 CD3EAPO15446 510 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 SERPINE1P05121 402 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 S100A1P23297 94 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 MGAT1P26572 445 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 TNFRSF8P28908 595 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 TGFBR2P37173 567 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 NET1Q7Z628 596 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 PIGKQ92643 395 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 MASTLQ96GX5 879 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 KIAA1683Q9H0B3 1180 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 REEP1Q9H902 201 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 CRTAMO95727 393 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 GARTP22102 1010 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 RPL21P46778 160 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 DENND5AQ6IQ26 1287 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 OSGEPL1Q9H4B0 414 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 JMJD4Q9H9V9 463 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 DRG1Q9Y295 367 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 PRKAB1Q9Y478 270 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 FLT1P17948 1338 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms