RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 MAPK9P45984 424 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 NAB1Q13506 487 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 EZH2Q15910 746 aaKnown RBP15.18■□□□□ 0.02
LMX1B-201ENST00000355497 CYP2R1Q6VVX0 501 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 ARHGAP22Q7Z5H3 698 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 ENGASEQ8NFI3 743 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 SEMA4DQ92854 862 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 PCDHA3Q9Y5H8 950 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 SPTLC1O15269 473 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 TPH1P17752 444 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 MTA1Q13330 715 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 SAMD4BQ5PRF9 694 aaKnown RBP15.18■□□□□ 0.02
LMX1B-201ENST00000355497 MFSD7Q6UXD7 560 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 C1orf50Q9BV19 199 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 TAS2R13Q9NYV9 303 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 ITGA11Q9UKX5 1188 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 FGRP09769 529 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 H2AFXP16104 143 aaPredicted RBP15.18■□□□□ 0.02
LMX1B-201ENST00000355497 CCR1P32246 355 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 CCT3P49368 545 aaKnown RBP15.18■□□□□ 0.02
LMX1B-201ENST00000355497 PSMD4P55036 377 aaKnown RBP15.18■□□□□ 0.02
LMX1B-201ENST00000355497 TOP3AQ13472 1001 aaPredicted RBP15.18■□□□□ 0.02
LMX1B-201ENST00000355497 TSHZ1Q6ZSZ6 1077 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 ASB2Q96Q27 587 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 ZCCHC2Q9C0B9 1178 aaKnown RBP15.18■□□□□ 0.02
LMX1B-201ENST00000355497 SEMA6BQ9H3T3 888 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 ZMYM5Q9UJ78 669 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 C15orf38-AP3S2A0A0A6YYH1 394 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 TFRCP02786 760 aaKnown RBP15.17■□□□□ 0.02
LMX1B-201ENST00000355497 CCNA2P20248 432 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 MGAT1P26572 445 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 HIRAP54198 1017 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-201ENST00000355497 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
LMX1B-201ENST00000355497 CCNIQ14094 377 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 MYBPC2Q14324 1141 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 ARPINQ7Z6K5 226 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 ITIH5Q86UX2 942 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 ZDHHC13Q8IUH4 622 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 ZSCAN18Q8TBC5 510 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-201ENST00000355497 CELF6Q96J87 481 aaKnown RBP15.17■□□□□ 0.02
LMX1B-201ENST00000355497 TMEM237Q96Q45 408 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 SEMA6AQ9H2E6 1030 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 EHD3Q9NZN3 535 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 AP3M1Q9Y2T2 418 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 CEP170Q5SW79 1584 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 MYL6P60660 151 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 TIMM50Q3ZCQ8 353 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 IRAK1BP1Q5VVH5 260 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 FAM20CQ8IXL6 584 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 L1RE1Q9UN81 338 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 GSTK1Q9Y2Q3 226 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 TNS3Q68CZ2 1445 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 CAMTA2O94983 1202 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 NEK3P51956 506 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 MAPK10P53779 464 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 ADARP55265 1226 aaKnown RBP15.17■□□□□ 0.02
LMX1B-201ENST00000355497 SPIRE1Q08AE8 756 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 PRAMEF18Q5VWM3 479 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 SNX32Q86XE0 403 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 ZSWIM2Q8NEG5 633 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 METTL6Q8TCB7 284 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 MCOLN3Q8TDD5 553 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 COQ6Q9Y2Z9 468 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 CRB1P82279 1406 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 RPN2P04844 631 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 KCTD21Q4G0X4 260 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF276Q8N554 614 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 INVSQ9Y283 1065 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 N6AMT1Q9Y5N5 214 aa15.17■□□□□ 0.02
LMX1B-201ENST00000355497 CHURC1-FNTBB4DL54 471 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 GLI1P08151 1106 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 CDK16Q00536 496 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 BOP1Q14137 746 aaKnown RBP15.16■□□□□ 0.02
LMX1B-201ENST00000355497 Q4G0T1 1027 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 C8orf59Q8N0T1 100 aaPredicted RBP15.16■□□□□ 0.02
LMX1B-201ENST00000355497 HASPINQ8TF76 798 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 CDRT15Q96T59 188 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 SLC25A23Q9BV35 468 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 SEMA4AQ9H3S1 761 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 TRHDEQ9UKU6 1024 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 TMA7Q9Y2S6 64 aaKnown RBP15.16■□□□□ 0.02
LMX1B-201ENST00000355497 A0A096LPK6 155 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 RBAK-RBAKDNI3L0D1 243 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 EPN2O95208 641 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 KCNH1O95259 989 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 CYP1A1P04798 512 aaPredicted RBP15.16■□□□□ 0.02
LMX1B-201ENST00000355497 ALADP13716 330 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 CROCCP3Q8IVE0 287 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF34Q8IZ26 560 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 ABRAQ8N0Z2 381 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 ACTL9Q8TC94 416 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 HTR3CQ8WXA8 447 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 TNFRSF21O75509 655 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 PIK3CGP48736 1102 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 CDK7P50613 346 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 SGCGQ13326 291 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 INO80DQ53TQ3 878 aaPredicted RBP15.16■□□□□ 0.02
LMX1B-201ENST00000355497 SCARA3Q6AZY7 606 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 GLT6D1Q7Z4J2 308 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 SYT12Q8IV01 421 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms