RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 GSTA3Q16772 222 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 OR56A4Q8NGH8 313 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 CENPTQ96BT3 561 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 REPS1Q96D71 796 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 BBS4Q96RK4 519 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 OSBPL6Q9BZF3 934 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 MFSD1Q9H3U5 465 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 RNF19AQ9NV58 838 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 MARCH2Q9P0N8 246 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 ZMYM5Q9UJ78 669 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 AP4S1Q9Y587 144 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 CNOT3O75175 753 aaKnown RBP18.39■□□□□ 0.53
COL18A1-202ENST00000355480 PARNO95453 639 aaKnown RBP18.39■□□□□ 0.53
COL18A1-202ENST00000355480 NFICP08651 508 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 ATP6V1C1P21283 382 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 MLH1P40692 756 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 SCNN1GP51170 649 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 MAP4K3Q8IVH8 894 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 OSCP1Q8WVF1 389 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 ABCC13Q9NSE7 274 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 TBC1D3BA6NDS4 549 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 BTN3A1O00481 513 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 NUDT14O95848 222 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 FMO4P31512 558 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 FEN1P39748 380 aaKnown RBP18.39■□□□□ 0.53
COL18A1-202ENST00000355480 MFSD7Q6UXD7 560 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 HACD1B0YJ81 288 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 EML1O00423 815 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 HSMCR30P0CW71 290 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 MIPP30301 263 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 METTL6Q8TCB7 284 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 UTP15Q8TED0 518 aaKnown RBP18.39■□□□□ 0.53
COL18A1-202ENST00000355480 LENG9Q96B70 501 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 SEMA4AQ9H3S1 761 aa18.39■□□□□ 0.53
COL18A1-202ENST00000355480 PAPOLBQ9NRJ5 636 aaKnown RBP18.39■□□□□ 0.53
COL18A1-202ENST00000355480 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.53
COL18A1-202ENST00000355480 CNPP09543 421 aaKnown RBP18.38■□□□□ 0.53
COL18A1-202ENST00000355480 FCGR1AP12314 374 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 PTPRAP18433 802 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 PABPC1LQ4VXU2 614 aaKnown RBP18.38■□□□□ 0.53
COL18A1-202ENST00000355480 KCNT2Q6UVM3 1135 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 SPATA20Q8TB22 786 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 SEMA4DQ92854 862 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 A0A096LPK6 155 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 SERPINA4P29622 427 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 RAD23AP54725 363 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 TRIM71Q2Q1W2 868 aaKnown RBP18.38■□□□□ 0.53
COL18A1-202ENST00000355480 ANKRD63C9JTQ0 380 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 SERPINE1P05121 402 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 EARS2Q5JPH6 523 aaKnown RBP18.38■□□□□ 0.53
COL18A1-202ENST00000355480 TBCELQ5QJ74 424 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 TRAPPC5Q8IUR0 188 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 CCDC103Q8IW40 242 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 NACC2Q96BF6 587 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 LINC00854A0A1B0GVQ3 168 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 ENO4A6NNW6 628 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 ZBTB14O43829 449 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 DLGAP3O95886 979 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 CXCL17Q6UXB2 119 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 USP45Q70EL2 814 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 SEPHS2Q99611 448 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 POLR1EQ9GZS1 481 aaKnown RBP18.38■□□□□ 0.53
COL18A1-202ENST00000355480 STMN3Q9NZ72 180 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 PPRC1Q5VV67 1664 aaKnown RBP18.38■□□□□ 0.53
COL18A1-202ENST00000355480 MYPNQ86TC9 1320 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 MAGEA13PA6NCF6 341 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 TK2O00142 265 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 CABYRO75952 493 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 HMGCRP04035 888 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 GLI1P08151 1106 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 GPR15P49685 360 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 ILF2Q12905 390 aaKnown RBP18.38■□□□□ 0.53
COL18A1-202ENST00000355480 TYW3Q6IPR3 259 aaKnown RBP18.38■□□□□ 0.53
COL18A1-202ENST00000355480 ZBTB49Q6ZSB9 765 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 ZFPM1Q8IX07 1006 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 USP7Q93009 1102 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 SLC35C1Q96A29 364 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 MAP10Q9P2G4 905 aa18.38■□□□□ 0.53
COL18A1-202ENST00000355480 UBA1P22314 1058 aaKnown RBP18.37■□□□□ 0.53
COL18A1-202ENST00000355480 ATP5C1P36542 298 aaKnown RBP18.37■□□□□ 0.53
COL18A1-202ENST00000355480 RIPK2O43353 540 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 TRIM13O60858 407 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 EIF4BP23588 611 aaKnown RBP18.37■□□□□ 0.53
COL18A1-202ENST00000355480 CLK2P49760 499 aaKnown RBP18.37■□□□□ 0.53
COL18A1-202ENST00000355480 THOP1P52888 689 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.37■□□□□ 0.53
COL18A1-202ENST00000355480 SLC30A9Q6PML9 568 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 TRAF7Q6Q0C0 670 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 TINF2Q9BSI4 451 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 ZNF839A8K0R7 811 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 GJB6O95452 261 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 GRIK3Q13003 919 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 FAM98BQ52LJ0 330 aaKnown RBP18.37■□□□□ 0.53
COL18A1-202ENST00000355480 RINLQ6ZS11 566 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 FAM228AQ86W67 206 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 RGL4Q8IZJ4 473 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 DEFB107AQ8IZN7 70 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 KYQ8NBH2 561 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 MTMR8Q96EF0 704 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 SH3BGRLO75368 114 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms