RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 POLR2EP19388 210 aaKnown RBP13.48□□□□□ -0.25
SCN8A-202ENST00000355133 CRABP2P29373 138 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 CCDC153Q494R4 210 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 IQSEC1Q6DN90 963 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 MAP4K3Q8IVH8 894 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 MCOLN3Q8TDD5 553 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 TPD52L3Q96J77 140 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 ZCCHC2Q9C0B9 1178 aaKnown RBP13.48□□□□□ -0.25
SCN8A-202ENST00000355133 GRK4P32298 578 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 SOX6P35712 828 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 MMP13P45452 471 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 ZBTB49Q6ZSB9 765 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 LUZP2Q86TE4 346 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 LZTR1Q8N653 840 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 CDHR5Q9HBB8 845 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 LRRC4BQ9NT99 713 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 KLHL28Q9NXS3 571 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 PTPRAP18433 802 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 UBA1P22314 1058 aaKnown RBP13.48□□□□□ -0.25
SCN8A-202ENST00000355133 PLK1P53350 603 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 NCF4Q15080 339 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 WDR59Q6PJI9 974 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 TRAF7Q6Q0C0 670 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 METTL6Q8TCB7 284 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 PPP1R14AQ96A00 147 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 CENPTQ96BT3 561 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 DUSP9Q99956 384 aaKnown RBP13.48□□□□□ -0.25
SCN8A-202ENST00000355133 SYBUQ9NX95 663 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 NCKAP1Q9Y2A7 1128 aa13.48□□□□□ -0.25
SCN8A-202ENST00000355133 SERPINE1P05121 402 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 RBL1P28749 1068 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 GSSP48637 474 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 DLG4P78352 724 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 IL5RAQ01344 420 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 TCEA2Q15560 299 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 ZCWPW2Q504Y3 356 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 ARMC12Q5T9G4 340 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 WSCD1Q658N2 575 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 TYW3Q6IPR3 259 aaKnown RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 DNAJC14Q6Y2X3 702 aaPredicted RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 KCNK18Q7Z418 384 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 FAM228AQ86W67 206 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 DPP10Q8N608 796 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 SPACA7Q96KW9 195 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 IDI2Q9BXS1 227 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 F8VP50 259 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 NFICP08651 508 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 CLTBP09497 229 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 IGFBP4P22692 258 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 CORO7P57737 925 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 SETMARQ53H47 684 aaPredicted RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 CXCL17Q6UXB2 119 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 OR56A4Q8NGH8 313 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 AHCYL2Q96HN2 611 aaKnown RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 VCPIP1Q96JH7 1222 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 SH3GL3Q99963 347 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 KLHL4Q9C0H6 718 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 POMKQ9H5K3 350 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 NINJ2Q9NZG7 142 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 UMODL1Q5DID0 1318 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 UBOX5O94941 541 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 KYQ8NBH2 561 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 NLNQ9BYT8 704 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 BLOC1S4Q9NUP1 217 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 MTA2O94776 668 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 OASLQ15646 514 aaKnown RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 ZCCHC8Q6NZY4 707 aaKnown RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 RBM43Q6ZSC3 357 aaKnown RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 ZCCHC23Q6ZST2 131 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 CDK20Q8IZL9 346 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 PURBQ96QR8 312 aaKnown RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 MARCH2Q9P0N8 246 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 PTPN1P18031 435 aaKnown RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 NOS3P29474 1203 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 IKBKEQ14164 716 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 TCHHL1Q5QJ38 904 aaPredicted RBP13.47□□□□□ -0.25
SCN8A-202ENST00000355133 DSG4Q86SJ6 1040 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 GRIN3AQ8TCU5 1115 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 BBS4Q96RK4 519 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 HES2Q9Y543 173 aa13.47□□□□□ -0.25
SCN8A-202ENST00000355133 CCDC154A6NI56 674 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 FAM220BPB1ANY3 271 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 TRIM13O60858 407 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 NUDT14O95848 222 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 HIRAP54198 1017 aaPredicted RBP13.46□□□□□ -0.25
SCN8A-202ENST00000355133 FAAP100Q0VG06 881 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 GRIK3Q13003 919 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 MAD2L1Q13257 205 aaPredicted RBP13.46□□□□□ -0.25
SCN8A-202ENST00000355133 MTA1Q13330 715 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 FASTKQ14296 549 aaKnown RBP13.46□□□□□ -0.25
SCN8A-202ENST00000355133 C15orf59Q2T9L4 293 aaPredicted RBP13.46□□□□□ -0.25
SCN8A-202ENST00000355133 CELF3Q5SZQ8 465 aaKnown RBP13.46□□□□□ -0.25
SCN8A-202ENST00000355133 HLA-DQA1Q5Y7H0 255 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 FBXL19Q6PCT2 694 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 TMEM26Q6ZUK4 368 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 ABCC13Q9NSE7 274 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 NFKBIL1Q9UBC1 381 aaPredicted RBP13.46□□□□□ -0.25
SCN8A-202ENST00000355133 AP4S1Q9Y587 144 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 CNOT3O75175 753 aaKnown RBP13.46□□□□□ -0.25
SCN8A-202ENST00000355133 PKN2Q16513 984 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms