RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 OPLAHO14841 1288 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 ANGPT2O15123 496 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 STMN1P16949 149 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 FAM228AQ86W67 206 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 ARL14EPQ8N8R7 260 aaPredicted RBP9.94□□□□□ -0.82
GABPA-201ENST00000354828 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.94□□□□□ -0.82
GABPA-201ENST00000354828 MED8Q96G25 268 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 ARHGAP28Q9P2N2 729 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 ZNHIT2Q9UHR6 403 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 NWD2Q9ULI1 1742 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 PNMA8BQ9ULN7 279 aaPredicted RBP9.94□□□□□ -0.82
GABPA-201ENST00000354828 DUSP10Q9Y6W6 482 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 ZSCAN5CA6NGD5 496 aaPredicted RBP9.94□□□□□ -0.82
GABPA-201ENST00000354828 DCTN3O75935 186 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 SUPT7LO94864 414 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 AARSP49588 968 aaKnown RBP eCLIP9.94□□□□□ -0.82
GABPA-201ENST00000354828 STX3Q13277 289 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 CXorf40BQ96DE9 158 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 SNX27Q96L92 541 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 MFSD14AQ96MC6 490 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 MLPHQ9BV36 600 aaPredicted RBP9.94□□□□□ -0.82
GABPA-201ENST00000354828 RIC8BQ9NVN3 520 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 GRID1Q9ULK0 1009 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 CAPN7Q9Y6W3 813 aa9.94□□□□□ -0.82
GABPA-201ENST00000354828 SIGLEC16A6NMB1 481 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 GRM6O15303 877 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 OPHN1O60890 802 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 SLC5A3P53794 718 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 ABCE1P61221 599 aaKnown RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 NLRP9Q7RTR0 991 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 EXOC2Q96KP1 924 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 B3GALT6Q96L58 329 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 TLR9Q9NR96 1032 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 VPS51Q9UID3 782 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 MSI1O43347 362 aaKnown RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 PCNAP12004 261 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 CYP2A7P20853 494 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 LILRA4P59901 499 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 MAPRE2Q15555 327 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 FBXO36Q8NEA4 188 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 OSCP1Q8WVF1 389 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 ACBD6Q9BR61 282 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 EPC1Q9H2F5 836 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 AVENQ9NQS1 362 aaPredicted RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 PIH1D1Q9NWS0 290 aaKnown RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 NAALADL1Q9UQQ1 740 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 GLI3P10071 1580 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 TRIM49D1C9J1S8 452 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 TIMM44O43615 452 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 RNASEH2AO75792 299 aaKnown RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 FSHRP23945 695 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 GPC1P35052 558 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 RFC1P35251 1148 aaPredicted RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 COL9A3Q14050 684 aaPredicted RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 MFSD7Q6UXD7 560 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 OTOP3Q7RTS5 596 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 LRRC6Q86X45 466 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 EPS8L1Q8TE68 723 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 ARL8AQ96BM9 186 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 GPAMQ9HCL2 828 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 RAD18Q9NS91 495 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 DNAJC16Q9Y2G8 782 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 STRCP1A6NGW2 1772 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 WNT7AO00755 349 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 STAU1O95793 577 aaKnown RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 ZNF143P52747 638 aaPredicted RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 PPP2R2AP63151 447 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 HYIQ5T013 277 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 ANKS6Q68DC2 871 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 CHST9Q7L1S5 443 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 EFL1Q7Z2Z2 1120 aaKnown RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 STRA8Q7Z7C7 330 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 CASP10Q92851 521 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 FCRL2Q96LA5 508 aaPredicted RBP9.93□□□□□ -0.82
GABPA-201ENST00000354828 VAT1Q99536 393 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 TBL1YQ9BQ87 522 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 CPQQ9Y646 472 aa9.93□□□□□ -0.82
GABPA-201ENST00000354828 CACNB4O00305 520 aaPredicted RBP9.92□□□□□ -0.82
GABPA-201ENST00000354828 DDX3XO00571 662 aaKnown RBP eCLIP9.92□□□□□ -0.829e-7■■■□□ 18.6
GABPA-201ENST00000354828 TGFB1I1O43294 461 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 SP2Q02086 613 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 PRR23BQ6ZRT6 265 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 PANX3Q96QZ0 392 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 ARHGEF4Q9NR80 690 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 A0A1B0GUA9 196 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 TARSL2A2RTX5 802 aaKnown RBP9.92□□□□□ -0.82
GABPA-201ENST00000354828 GUCA1CO95843 209 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 OCM2P0CE71 109 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 OCMP0CE72 109 aaPredicted RBP9.92□□□□□ -0.82
GABPA-201ENST00000354828 TYMPP19971 482 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 CD86P42081 329 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 TRIM32Q13049 653 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 CCNG2Q16589 344 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 ZSCAN26Q16670 478 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 TIGD5Q53EQ6 642 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 SH3RF1Q7Z6J0 888 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 MTBPQ96DY7 904 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 RAD9AQ99638 391 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 IKZF4Q9H2S9 585 aa9.92□□□□□ -0.82
GABPA-201ENST00000354828 PPCSQ9HAB8 311 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms