RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 MED22Q15528 200 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 INTS6LQ5JSJ4 861 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 TDRPQ86YL5 185 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 GABBR1Q9UBS5 961 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 COG5Q9UP83 839 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ERGIC3Q9Y282 383 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ALG5Q9Y673 324 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 MROH7-TTC4A0A0A0MT08 1334 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 COASYQ13057 564 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 GPR139Q6DWJ6 353 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 AGMOQ6ZNB7 445 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF540Q8NDQ6 660 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 LRRC4BQ9NT99 713 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 RAB23Q9ULC3 237 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 NDUFAF1Q9Y375 327 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PCDHGA10Q9Y5H3 936 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ECHS1P30084 290 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 IL13P35225 146 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 SKIV2L2P42285 1042 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PGDP52209 483 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 SPIDRQ14159 915 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 MYO1HQ8N1T3 1032 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 C11orf24Q96F05 449 aaPredicted RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 TMEM237Q96Q45 408 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 VPS45Q9NRW7 570 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 MPOP05164 745 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 HARS2P49590 506 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 RCAN1P53805 252 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF621Q6ZSS3 439 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 FAM71DQ8N9W8 422 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 GRPEL2Q8TAA5 225 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 OSGEPL1Q9H4B0 414 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 TRIM36Q9NQ86 728 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 CCDC167Q9P0B6 97 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 RSL24D1Q9UHA3 163 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ARPC4-TTLL3A0A0A6YYG9 625 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 H7C1W4 665 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 TUBG1P23258 451 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 HIRAP54198 1017 aaPredicted RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 DRG2P55039 364 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 CDH18Q13634 790 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 GALNT18Q6P9A2 607 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ADHFE1Q8IWW8 467 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ZZZ3Q8IYH5 903 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 OR5T3Q8NGG3 340 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF471Q9BX82 626 aaPredicted RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 CCNT2O60583 730 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 NR3C2P08235 984 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 SRCP12931 536 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 LHCGRP22888 699 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 MAPK9P45984 424 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 MLLT6P55198 1093 aaPredicted RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PKN1Q16512 942 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PLA2G4EQ3MJ16 856 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 MFSD7Q6UXD7 560 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PPIL6Q8IXY8 311 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 REXO5Q96IC2 774 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 SLC38A2Q96QD8 506 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 FAM105AQ9NUU6 356 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 EIF3KQ9UBQ5 218 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 UBOX5O94941 541 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 AP3M2P53677 418 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 BNIP2Q12982 314 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 MADCAM1Q13477 382 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 SNX17Q15036 470 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 RHEBQ15382 184 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ZIK1Q3SY52 487 aaPredicted RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 CWF19L1Q69YN2 538 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 Q96MT0 163 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF341Q9BYN7 854 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PDGFRBP09619 1106 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PTPN4P29074 926 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ACADSBP45954 432 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 SLC1A6P48664 564 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 FASTKQ14296 549 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PIK3R6Q5UE93 754 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 C1orf94Q6P1W5 598 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 FSTL5Q8N475 847 aaPredicted RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PPP1R13LQ8WUF5 828 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF208O43345 1280 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 THRBP10828 461 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PDGFRAP16234 1089 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ATP4AP20648 1035 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 ADORA1P30542 326 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 POLD2P49005 469 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 BROXQ5VW32 411 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 RBM44Q6ZP01 1051 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 TREM1Q9NP99 234 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 CYP2C8P10632 490 aa8.18□□□□□ -1.1
SCN8A-201ENST00000354534 H2AFXP16104 143 aaPredicted RBP8.18□□□□□ -1.1
SCN8A-201ENST00000354534 GADD45AP24522 165 aa8.18□□□□□ -1.1
SCN8A-201ENST00000354534 ZBTB6Q15916 424 aa8.18□□□□□ -1.1
SCN8A-201ENST00000354534 ATP13A4Q4VNC1 1196 aa8.18□□□□□ -1.1
SCN8A-201ENST00000354534 WASHC2DQ5SRD0 308 aa8.18□□□□□ -1.1
SCN8A-201ENST00000354534 COMTD1Q86VU5 262 aa8.18□□□□□ -1.1
SCN8A-201ENST00000354534 ATL1Q8WXF7 558 aa8.18□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF512Q96ME7 567 aaPredicted RBP8.18□□□□□ -1.1
SCN8A-201ENST00000354534 ARMCX1Q9P291 453 aa8.18□□□□□ -1.1
SCN8A-201ENST00000354534 TDRKHQ9Y2W6 561 aaKnown RBP8.18□□□□□ -1.1
SCN8A-201ENST00000354534 ADGRG1Q9Y653 693 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms