RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 POLR1BQ9H9Y6 1135 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 PLXNA2O75051 1894 aa16.52■□□□□ 0.23
DDX55-202ENST00000354291 DXOO77932 396 aaKnown RBP16.51■□□□□ 0.23
DDX55-202ENST00000354291 NTRK1P04629 796 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 SLFN14P0C7P3 912 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 TRIM21P19474 475 aaKnown RBP16.51■□□□□ 0.23
DDX55-202ENST00000354291 AFMP43652 599 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 CCR5P51681 352 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 PDE4CQ08493 712 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 CST6Q15828 149 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 TMC6Q7Z403 805 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 UNC93AQ86WB7 457 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 MMAAQ8IVH4 418 aaKnown RBP16.51■□□□□ 0.23
DDX55-202ENST00000354291 NELFCDQ8IXH7 590 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 OR14C36Q8NHC7 312 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 DEPDC7Q96QD5 511 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 THSD1Q9NS62 852 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 WDR70Q9NW82 654 aa16.51■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3DA0A087WVF3 549 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3IA0A087WXS9 549 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3EA0A087X179 549 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3KA0A087X1G2 549 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3FA6NER0 549 aaPredicted RBP16.5■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3LB9A6J9 549 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 K7ENP7 123 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 OPA1O60313 960 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 SIN3BO75182 1162 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 CSO75390 466 aaKnown RBP16.5■□□□□ 0.23
DDX55-202ENST00000354291 VNN1O95497 513 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3HP0C7X1 549 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 CASP1P29466 404 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 SLC8A1P32418 973 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 HARS2P49590 506 aaKnown RBP16.5■□□□□ 0.23
DDX55-202ENST00000354291 ST8SIA6P61647 398 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 ZNF211Q13398 564 aaPredicted RBP16.5■□□□□ 0.23
DDX55-202ENST00000354291 KNOP1Q1ED39 458 aaKnown RBP16.5■□□□□ 0.23
DDX55-202ENST00000354291 HS1BP3Q53T59 392 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3GQ6DHY5 549 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3CQ6IPX1 549 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 INO80CQ6PI98 192 aaPredicted RBP16.5■□□□□ 0.23
DDX55-202ENST00000354291 FAM217AQ8IXS0 508 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 TBC1D3Q8IZP1 549 aaPredicted RBP16.5■□□□□ 0.23
DDX55-202ENST00000354291 MFSD2AQ8NA29 543 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 ABCG4Q9H172 646 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 PNPLA8Q9NP80 782 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 SLC39A2Q9NP94 309 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 USP3Q9Y6I4 520 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 FLNCQ14315 2725 aa16.5■□□□□ 0.23
DDX55-202ENST00000354291 EXOC3O60645 756 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 C4BPAP04003 597 aaKnown RBP16.49■□□□□ 0.23
DDX55-202ENST00000354291 CD70P32970 193 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 NFKB2Q00653 900 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 CUL4BQ13620 913 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 SGSM1Q2NKQ1 1148 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 CDCP2Q5VXM1 449 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 SPOPLQ6IQ16 392 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 CCDC81Q6ZN84 652 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 KIAA0907Q7Z7F0 614 aaPredicted RBP16.49■□□□□ 0.23
DDX55-202ENST00000354291 C12orf56Q8IXR9 622 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 SLC25A45Q8N413 288 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 EXD3Q8N9H8 876 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 GOLGA5Q8TBA6 731 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 PLEKHO2Q8TD55 490 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 PLD4Q96BZ4 506 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 TWNKQ96RR1 684 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 ASCL3Q9NQ33 180 aa16.49■□□□□ 0.23
DDX55-202ENST00000354291 TP53BP1Q12888 1972 aaPredicted RBP16.48■□□□□ 0.23
DDX55-202ENST00000354291 MYF5P13349 255 aa16.48■□□□□ 0.23
DDX55-202ENST00000354291 CMA1P23946 247 aa16.48■□□□□ 0.23
DDX55-202ENST00000354291 RBMS1P29558 406 aaKnown RBP16.48■□□□□ 0.23
DDX55-202ENST00000354291 AP3M2P53677 418 aa16.48■□□□□ 0.23
DDX55-202ENST00000354291 SND1Q7KZF4 910 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDX55-202ENST00000354291 PRPF39Q86UA1 669 aaKnown RBP16.48■□□□□ 0.23
DDX55-202ENST00000354291 ARHGAP18Q8N392 663 aa16.48■□□□□ 0.23
DDX55-202ENST00000354291 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDX55-202ENST00000354291 DUSP16Q9BY84 665 aa16.48■□□□□ 0.23
DDX55-202ENST00000354291 USP25Q9UHP3 1055 aa16.48■□□□□ 0.23
DDX55-202ENST00000354291 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
DDX55-202ENST00000354291 FZD4Q9ULV1 537 aa16.48■□□□□ 0.23
DDX55-202ENST00000354291 LRRIQ3A6PVS8 624 aaPredicted RBP16.47■□□□□ 0.23
DDX55-202ENST00000354291 FFAR2O15552 330 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 MYL1P05976 194 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 GOT1P17174 413 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 MAT2AP31153 395 aaKnown RBP16.47■□□□□ 0.23
DDX55-202ENST00000354291 PSMD8P48556 350 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 SGSHP51688 502 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 YWHAGP61981 247 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDX55-202ENST00000354291 PPP2CBP62714 309 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 PPP2CAP67775 309 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 STAT4Q14765 748 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 TRIP4Q15650 581 aaPredicted RBP16.47■□□□□ 0.23
DDX55-202ENST00000354291 HNRNPA1L2Q32P51 320 aaKnown RBP16.47■□□□□ 0.23
DDX55-202ENST00000354291 ZSCAN23Q3MJ62 389 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 SGO2Q562F6 1265 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 C3orf38Q5JPI3 329 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 NAPEPLDQ6IQ20 393 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 ZNF574Q6ZN55 896 aaPredicted RBP16.47■□□□□ 0.23
DDX55-202ENST00000354291 ATG14Q6ZNE5 492 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 WFDC5Q8TCV5 224 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 PAGE5Q96GU1 130 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms