RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CAND1Q86VP6 1230 aaKnown RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 P3H2Q8IVL5 708 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 NFKBIDQ8NI38 313 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 SLC2A12Q8TD20 617 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 WDR60Q8WVS4 1066 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 SECISBP2LQ93073 1101 aaKnown RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 PABPC5Q96DU9 382 aaKnown RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 BAG1Q99933 345 aaPredicted RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 PTDSS2Q9BVG9 487 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 SSBP3Q9BWW4 388 aaPredicted RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 INTS2Q9H0H0 1204 aaKnown RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 OPA3Q9H6K4 179 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 VEZTQ9HBM0 779 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 PEMTQ9UBM1 199 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 CNOT7Q9UIV1 285 aaKnown RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 CA14Q9ULX7 337 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 SNX8Q9Y5X2 465 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 SNX5Q9Y5X3 404 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 A0A1B0GTW7 788 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 SPRY1O43609 319 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 LIASO43766 372 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM63AO94886 807 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 WDR47O94967 919 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 MBPP02686 304 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PPP3CBP16298 524 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 GCSHP23434 173 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 FPR3P25089 353 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CDH15P55291 814 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 MXRA7P84157 204 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TIAL1Q01085 375 aaKnown RBP eCLIP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CCNIQ14094 377 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PKN1Q16512 942 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 GAGE13Q4V321 117 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 DCAF17Q5H9S7 520 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CERCAMQ5T4B2 595 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 LIPMQ5VYY2 423 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CCDC144NLQ6NUI1 221 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 Q6ZRM9 215 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 RALYLQ86SE5 291 aaKnown RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF761Q86XN6 746 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 IZUMO1Q8IYV9 350 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ANKRD44Q8N8A2 993 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM116Q8NCL8 245 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 OR6J1Q8NGC5 347 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 MUC13Q9H3R2 512 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 FAM83DQ9H4H8 585 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 BARX1Q9HBU1 254 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PDE11AQ9HCR9 933 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PCMTD2Q9NV79 361 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 THAP1Q9NVV9 213 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 SH3BP4Q9P0V3 963 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 SEL1LQ9UBV2 794 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 SLCO3A1Q9UIG8 710 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 BAG5Q9UL15 447 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PADI1Q9ULC6 663 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ITGALP20701 1170 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ARL3P36405 182 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PNPLA4P41247 253 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 GSTM5P46439 218 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM62Q0P6H9 643 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 FOXL1Q12952 345 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 NFE2L1Q14494 772 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PKN2Q16513 984 aaKnown RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PREPLQ4J6C6 727 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 AWAT1Q58HT5 328 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF766Q5HY98 468 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF569Q5MCW4 686 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 HECTD3Q5T447 861 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CAVIN1Q6NZI2 390 aaKnown RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TRAT1Q6PIZ9 186 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 IL27RAQ6UWB1 636 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 BRINP3Q76B58 766 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TAGAPQ8N103 731 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 FSIP1Q8NA03 581 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 SYT8Q8NBV8 401 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 GOT1L1Q8NHS2 421 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ADAMTS17Q8TE56 1095 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 SH3RF3Q8TEJ3 882 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 LPIN2Q92539 896 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D5Q92609 795 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ABHD8Q96I13 439 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CNDP2Q96KP4 475 aaKnown RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PRR25Q96S07 402 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 VN1R3Q9BXE9 311 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ACTRT3Q9BYD9 372 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 KRTAP3-1Q9BYR8 98 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 OR10A4Q9H209 315 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 EPHX3Q9H6B9 360 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 MTMR4Q9NYA4 1195 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TAS2R10Q9NYW0 307 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PLA2G3Q9NZ20 509 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 DNAJB9Q9UBS3 223 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 KLQ9UEF7 1012 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 INTS6Q9UL03 887 aaKnown RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 OAZ3Q9UMX2 235 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 COPG1Q9Y678 874 aaKnown RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PDS5BQ9NTI5 1447 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 COL15A1P39059 1388 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3DA0A087WVF3 549 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3IA0A087WXS9 549 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms