RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 TFR2Q9UP52 801 aa10.15□□□□□ -0.78
MRPL55-204ENST00000348259 MUC22E2RYF6 1773 aaPredicted RBP10.15□□□□□ -0.78
MRPL55-204ENST00000348259 SHROOM3Q8TF72 1996 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 MACROD2A1Z1Q3 448 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 DYNC1I1O14576 645 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 TRIM66O15016 1216 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 COCHO43405 550 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 MTA2O94776 668 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 FAM163BP0C2L3 166 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 P4HA1P13674 534 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 HOXB2P14652 356 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 NTSR1P30989 418 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 GRIK1P39086 918 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 GAD2Q05329 585 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 NUMA1Q14980 2115 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 WHAMMP3Q1A5X7 153 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 ZNF699Q32M78 642 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 EGFLAMQ63HQ2 1017 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 SPOPLQ6IQ16 392 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 TRMT11Q7Z4G4 463 aaKnown RBP10.14□□□□□ -0.79
MRPL55-204ENST00000348259 SLFN11Q7Z7L1 901 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 METTL3Q86U44 580 aaKnown RBP10.14□□□□□ -0.79
MRPL55-204ENST00000348259 TTC30AQ86WT1 665 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 DDX42Q86XP3 938 aaKnown RBP eCLIP10.14□□□□□ -0.79
MRPL55-204ENST00000348259 NAXDQ8IW45 347 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 RHOT2Q8IXI1 618 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 DEFB119Q8N690 84 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 C1orf216Q8TAB5 229 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 SLC20A1Q8WUM9 679 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 CTNNBL1Q8WYA6 563 aaPredicted RBP10.14□□□□□ -0.79
MRPL55-204ENST00000348259 RFFLQ8WZ73 363 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 OVCA2Q8WZ82 227 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 VCPIP1Q96JH7 1222 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 HSPA12BQ96MM6 686 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 PCDHB18PQ96TA0 734 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 ARID3AQ99856 593 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 MRPL45Q9BRJ2 306 aaKnown RBP10.14□□□□□ -0.79
MRPL55-204ENST00000348259 PACSIN1Q9BY11 444 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 EHD2Q9NZN4 543 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 BCCIPQ9P287 314 aaKnown RBP eCLIP10.14□□□□□ -0.79
MRPL55-204ENST00000348259 PCOLCE2Q9UKZ9 415 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 SAR1BQ9Y6B6 198 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 CAPN6Q9Y6Q1 641 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 ZNF462Q96JM2 2506 aa10.14□□□□□ -0.79
MRPL55-204ENST00000348259 KNTC1P50748 2209 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 UQCRHLA0A096LP55 91 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 PRRT4C9JH25 899 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 CES2O00748 559 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 CACNG3O60359 315 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 ZNF217O75362 1048 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 MOCS3O95396 460 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 FTLP02792 175 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-204ENST00000348259 CYP1A1P04798 512 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-204ENST00000348259 UQCRHP07919 91 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 SYPP08247 313 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 MMEP08473 750 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 PAEPP09466 180 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 ZNF883P0CG24 379 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 UNGP13051 313 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-204ENST00000348259 KRT5P13647 590 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 TCP1P17987 556 aaKnown RBP10.13□□□□□ -0.79
MRPL55-204ENST00000348259 ASPAP45381 313 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 PGFP49763 221 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 TUBP50607 506 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 GRIK2Q13002 908 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 ENPP2Q13822 863 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 CLEC16AQ2KHT3 1053 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 ZNF667Q5HYK9 610 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 MDH1BQ5I0G3 518 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 ACAD10Q6JQN1 1059 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 PAQR9Q6ZVX9 377 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 TMPRSS7Q7RTY8 843 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 TMEM25Q86YD3 366 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 BBS7Q8IWZ6 715 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 SYCE1Q8N0S2 351 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 CEP112Q8N8E3 955 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 PNPLA1Q8N8W4 532 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 LRRC57Q8N9N7 239 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 RBBP8NLQ8NC74 664 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-204ENST00000348259 MDM1Q8TC05 714 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 IPO4Q8TEX9 1081 aaKnown RBP10.13□□□□□ -0.79
MRPL55-204ENST00000348259 COL26A1Q96A83 441 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 TRIM11Q96F44 468 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 HPDLQ96IR7 371 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 MRGPRX1Q96LB2 322 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 B3GNT5Q9BYG0 378 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 ZNF518BQ9C0D4 1074 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 CCDC86Q9H6F5 360 aaKnown RBP10.13□□□□□ -0.79
MRPL55-204ENST00000348259 SPHK2Q9NRA0 654 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 CISHQ9NSE2 258 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 MARK1Q9P0L2 795 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 RNF14Q9UBS8 474 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 FBXO10Q9UK96 956 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 KIAA1257Q9ULG3 409 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 SNX12Q9UMY4 172 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 PCDHB4Q9Y5E5 795 aa10.13□□□□□ -0.79
MRPL55-204ENST00000348259 COL5A1P20908 1838 aaPredicted RBP10.12□□□□□ -0.79
MRPL55-204ENST00000348259 A0A087WV48 116 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 TBC1D3BA6NDS4 549 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms