RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 PI4K2AQ9BTU6 479 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 LSM14BQ9BX40 385 aaKnown RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CNTNAP3Q9BZ76 1288 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TTYH3Q9C0H2 523 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CWH43Q9H720 699 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 NRDE2Q9H7Z3 1164 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 APOBEC3GQ9HC16 384 aaKnown RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 WASH6PQ9NQA3 447 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ZNF624Q9P2J8 865 aaPredicted RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 DNAJB4Q9UDY4 337 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 RPS6KA6Q9UK32 745 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 BRWD1Q9NSI6 2320 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 hCG_1807616A0A1W2PRN6 198 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CCDC66A2RUB6 948 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ZSCAN5CA6NGD5 496 aaPredicted RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CASTOR2A6NHX0 329 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 PLOD2O00469 737 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 GRM6O15303 877 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TUSC2O75896 110 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 UBXN7O94888 489 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TP53P04637 393 aaPredicted RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 EPHX1P07099 455 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 KRT19P08727 400 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 GSK3AP49840 483 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 IDH3AP50213 366 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TLR1Q15399 786 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CNN3Q15417 329 aaKnown RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 PFKFB4Q16877 469 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 PRSS53Q2L4Q9 553 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ZNF423Q2M1K9 1284 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 FIGNQ5HY92 759 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 IZUMO3Q5VZ72 239 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 SPECC1LQ69YQ0 1117 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 GPR153Q6NV75 609 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 DCLRE1AQ6PJP8 1040 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CD300LGQ6UXG3 332 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ZNF227Q86WZ6 799 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 LRRC43Q8N309 656 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 FIBCD1Q8N539 461 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 KCTD6Q8NC69 237 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 BCL7CQ8WUZ0 217 aaPredicted RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ELMO3Q96BJ8 720 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 HPDLQ96IR7 371 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 FAM210AQ96ND0 272 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TGS1Q96RS0 853 aaKnown RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 PAAF1Q9BRP4 392 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TMEM175Q9BSA9 504 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 NUP58Q9BVL2 599 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 GANQ9H2C0 597 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ZWILCHQ9H900 591 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 PRDM6Q9NQX0 595 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 AKAP7Q9P0M2 348 aaPredicted RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 C6orf203Q9P0P8 240 aaPredicted RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 KIF17Q9P2E2 1029 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 SUSD2Q9UGT4 822 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TMEM98Q9Y2Y6 226 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ARHGAP10A1A4S6 786 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 FAM227AF5H4B4 570 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 PODXLO00592 558 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 EPHB6O15197 1021 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 B3GALT2O43825 422 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TSHRP16473 764 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 C5AR1P21730 350 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CTNNB1P35222 781 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 PNPLA4P41247 253 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 GPR3P46089 330 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 RPIAP49247 311 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 SEC24CP53992 1094 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CREMQ03060 361 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 RNASELQ05823 741 aaKnown RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 LRMPQ12912 555 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 MYO1EQ12965 1108 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CAMK1Q14012 370 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 NFE2L1Q14494 772 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ANKRD39Q53RE8 183 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 DGKKQ5KSL6 1271 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 RNF220Q5VTB9 566 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 SPOPLQ6IQ16 392 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 GJB7Q6PEY0 223 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 RAPH1Q70E73 1250 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 B4GALNT4Q76KP1 1039 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TMC6Q7Z403 805 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ARHGEF19Q8IW93 802 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 CCDC150Q8NCX0 1101 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 LRRN4CLQ8ND94 238 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 NEK11Q8NG66 645 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 KRT35Q92764 455 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 IQCDQ96DY2 449 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 RUNDC3BQ96NL0 473 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 PPP1R9BQ96SB3 815 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 OBP2BQ9NPH6 170 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 AJAP1Q9UKB5 411 aaPredicted RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 PPM1HQ9ULR3 514 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 EDARQ9UNE0 448 aa5.38□□□□□ -1.55
VCAM1-202ENST00000347652 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 ZFP37Q9Y6Q3 630 aaPredicted RBP5.38□□□□□ -1.55
VCAM1-202ENST00000347652 TDRD15B5MCY1 1934 aaKnown RBP5.37□□□□□ -1.55
VCAM1-202ENST00000347652 A0A087X0M5 115 aa5.37□□□□□ -1.55
VCAM1-202ENST00000347652 A0A1B0GX30 115 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms