RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SERPINB5P36952 375 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 GARSP41250 739 aaKnown RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 ACADSBP45954 432 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 CRYBB1P53674 252 aaPredicted RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 HADHBP55084 474 aaKnown RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 SLC45A4Q5BKX6 768 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 CLEC20AQ6ZU45 233 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 ECHDC2Q86YB7 292 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 ZNF280BQ86YH2 543 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 DCBLD1Q8N8Z6 715 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 SEC14L1Q92503 715 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 ACTR5Q9H9F9 607 aaPredicted RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 NOD2Q9HC29 1040 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 SLC38A7Q9NVC3 462 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 SMG5Q9UPR3 1016 aaKnown RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 PSAT1Q9Y617 370 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 A0A0U1RQS6 177 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 ALOX15BO15296 676 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 LRIG2O94898 1065 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 ZNF132P52740 706 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 ITGA7Q13683 1181 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 GRB14Q14449 540 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 RPS27LQ71UM5 84 aaKnown RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 TTC9BQ8N6N2 239 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 RSPH1Q8WYR4 309 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 CLPTM1LQ96KA5 538 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 MAGEB18Q96M61 343 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 DUSP16Q9BY84 665 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 USH1CQ9Y6N9 552 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 CIB2O75838 187 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 PDE5AO76074 875 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 BST1Q10588 318 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 DUSP4Q13115 394 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 TTC39BQ5VTQ0 682 aaPredicted RBP13.65□□□□□ -0.22
CASC4-202ENST00000345795 WDR75Q8IWA0 830 aaKnown RBP13.65□□□□□ -0.22
CASC4-202ENST00000345795 PQLC3Q8N755 202 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 AUTS2Q8WXX7 1259 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 MCRS1Q96EZ8 462 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 GJD2Q9UKL4 321 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 CBX4O00257 560 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 SETSIPP0DME0 302 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 SCNN1BP51168 640 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 BZW1Q7L1Q6 419 aaKnown RBP13.65□□□□□ -0.22
CASC4-202ENST00000345795 SHCBP1Q8NEM2 672 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 URGCPQ8TCY9 931 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 BCO2Q9BYV7 579 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 CRTAC1Q9NQ79 661 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 DNAJB4Q9UDY4 337 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 KIAA1257Q9ULG3 409 aa13.65□□□□□ -0.22
CASC4-202ENST00000345795 MANSC4A6NHS7 340 aaPredicted RBP13.65□□□□□ -0.23
CASC4-202ENST00000345795 APOEP02649 317 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 UBAP2LQ14157 1087 aaKnown RBP13.65□□□□□ -0.23
CASC4-202ENST00000345795 CSHL1Q14406 222 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 ZNF235Q14590 738 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 TAF11Q15544 211 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 KYAT1Q16773 422 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 C1orf146Q5VVC0 180 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 ICE2Q659A1 982 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 TAF2Q6P1X5 1199 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 CDHR3Q6ZTQ4 885 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 ANKRD23Q86SG2 305 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 SLC35F5Q8WV83 523 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 IFT43Q96FT9 208 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 TXLNGQ9NUQ3 528 aa13.65□□□□□ -0.23
CASC4-202ENST00000345795 SMIM35A0A1B0GVV1 85 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 C9JVG2 144 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 ABLIM1O14639 778 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 FAM189A1O60320 539 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 GPC4O75487 556 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 F2P00734 622 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 L1CAMP32004 1257 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 CUL3Q13618 768 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 CNGA3Q16281 694 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 MMEL1Q495T6 779 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 ZNF280DQ6N043 979 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 FCRL2Q96LA5 508 aaPredicted RBP13.64□□□□□ -0.23
CASC4-202ENST00000345795 ZNF778Q96MU6 729 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 ZBED2Q9BTP6 218 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 ATP11BQ9Y2G3 1177 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.64□□□□□ -0.23
CASC4-202ENST00000345795 V9GYQ6 96 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 RREB1Q92766 1687 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 ATP6AP2A0A1C7CYW4 349 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 ATP6AP2O75787 350 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 ZFXP17010 805 aaPredicted RBP13.64□□□□□ -0.23
CASC4-202ENST00000345795 CCR1P32246 355 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 NOS2P35228 1153 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 PURAQ00577 322 aaKnown RBP13.64□□□□□ -0.23
CASC4-202ENST00000345795 POM121L1PQ3SYA9 428 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 LRRC38Q5VT99 294 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 TAC4Q86UU9 113 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 ZNF567Q8N184 647 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 SLC26A7Q8TE54 656 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 NKD2Q969F2 451 aaPredicted RBP13.64□□□□□ -0.23
CASC4-202ENST00000345795 PRR11Q96HE9 360 aaPredicted RBP13.64□□□□□ -0.23
CASC4-202ENST00000345795 COLEC11Q9BWP8 271 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 CCDC68Q9H2F9 335 aa13.64□□□□□ -0.23
CASC4-202ENST00000345795 APOBEC2Q9Y235 224 aaKnown RBP13.64□□□□□ -0.23
CASC4-202ENST00000345795 ARFGEF1Q9Y6D6 1849 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms