RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TADA2AO75478 443 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 SSTR3P32745 418 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-201ENST00000345617 COPZ1P61923 177 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 FAM196AQ6ZSG2 479 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 C17orf50Q8WW18 174 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 PMPCBO75439 489 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 AP3S2P59780 193 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 ENPEPQ07075 957 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 CDH17Q12864 832 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 ASAP1Q9ULH1 1129 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 PTGES3LE9PB15 166 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 HOXD10P28358 340 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 SEPHS2Q99611 448 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 CYP1A1P04798 512 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-201ENST00000345617 ALDH1A3P47895 512 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 STK32CQ86UX6 486 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 TRPV1Q8NER1 839 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 ZHX1-C8orf76Q96EF9 292 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 CMTM6Q9NX76 183 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 E2F8A0AVK6 867 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 ERI2A8K979 691 aaKnown RBP19.76■□□□□ 0.75
HDAC4-201ENST00000345617 GRAP2O75791 330 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 BHLHE22Q8NFJ8 381 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-201ENST00000345617 CYP2A7P20853 494 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 GPSM2P81274 684 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 YIPF2Q9BWQ6 316 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 DOLKQ9UPQ8 538 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 OPLAHO14841 1288 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 C5orf22Q49AR2 442 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 FAM49BQ9NUQ9 324 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 TNS3Q68CZ2 1445 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 KNL1Q8NG31 2342 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 GALNT18Q6P9A2 607 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 ZCCHC2Q9C0B9 1178 aaKnown RBP19.75■□□□□ 0.75
HDAC4-201ENST00000345617 SCRN3Q0VDG4 424 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 N4BP2L1Q5TBK1 243 aaPredicted RBP19.75■□□□□ 0.75
HDAC4-201ENST00000345617 BHLHB9Q6PI77 547 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 MOXD1Q6UVY6 613 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 BTN2A1Q7KYR7 527 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 TMIEQ8NEW7 156 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 MAGEC3Q8TD91 643 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 RFT1Q96AA3 541 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 MYO3AQ8NEV4 1616 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 B3GALNT2Q8NCR0 500 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 ZNF75CPQ92670 426 aaPredicted RBP19.75■□□□□ 0.75
HDAC4-201ENST00000345617 NLNQ9BYT8 704 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 NPHP3-ACAD11A0A0J9YXS1 232 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 SQLEQ14534 574 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 TUBA3EQ6PEY2 450 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 STK40Q8N2I9 435 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 LRMDAQ9H2I8 198 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 METTL21EPA6NDL7 271 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 HACD1B0YJ81 288 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 INSCQ1MX18 579 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 ZNF276Q8N554 614 aa19.75■□□□□ 0.75
HDAC4-201ENST00000345617 A0A088AWK7 358 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 RGS14O43566 566 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 CAMTA2O94983 1202 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 VIL1P09327 827 aaKnown RBP19.74■□□□□ 0.75
HDAC4-201ENST00000345617 ZNF10P21506 573 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-201ENST00000345617 PDK3Q15120 406 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 CIAPIN1Q6FI81 312 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 OR6B1O95007 311 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 C11orf74Q86VG3 221 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 AGPAT3Q9NRZ7 376 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 SNX8Q9Y5X2 465 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 COL15A1P39059 1388 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 MED24O75448 989 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 ST3GAL1Q11201 340 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 SRBD1Q8N5C6 995 aaKnown RBP19.74■□□□□ 0.75
HDAC4-201ENST00000345617 IGDCC4Q8TDY8 1250 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 PRCCQ92733 491 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-201ENST00000345617 TPD52L3Q96J77 140 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 DPY30Q9C005 99 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 PRRG1O14668 218 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 ACAP1Q15027 740 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 NT5DC4Q86YG4 428 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 FBXO25Q8TCJ0 367 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 LIMD1Q9UGP4 676 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 ZNF543Q08ER8 600 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 EEF1AKMT1Q8WVE0 214 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 HPS4Q9NQG7 708 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 RP1P56715 2156 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 ESRP1Q6NXG1 681 aaKnown RBP19.74■□□□□ 0.75
HDAC4-201ENST00000345617 A1CFQ9NQ94 594 aaKnown RBP19.74■□□□□ 0.75
HDAC4-201ENST00000345617 PRKAG3Q9UGI9 489 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 TULP4Q9NRJ4 1543 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 RPL22P35268 128 aaKnown RBP19.74■□□□□ 0.75
HDAC4-201ENST00000345617 RASSF6Q6ZTQ3 369 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 ACTR8Q9H981 624 aa19.74■□□□□ 0.75
HDAC4-201ENST00000345617 GP5P40197 560 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 CD151P48509 253 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 ZFP69Q49AA0 526 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 FBXO39Q8N4B4 442 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 SLC39A8Q9C0K1 460 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 MYBP10242 640 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 ATF6P18850 670 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 GPR15P49685 360 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 RGS7P49802 495 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 SBK1Q52WX2 424 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms