RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RFWD3Q6PCD5 774 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 PSTKQ8IV42 348 aaKnown RBP12.23□□□□□ -0.45
SNCA-202ENST00000345009 LRRC8AQ8IWT6 810 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 NAT16Q8N8M0 369 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 NIPA2Q8N8Q9 360 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 BHMTQ93088 406 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 ARHGEF26Q96DR7 871 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 RPRD1AQ96P16 312 aaPredicted RBP12.23□□□□□ -0.45
SNCA-202ENST00000345009 PACSIN1Q9BY11 444 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 OSBPL2Q9H1P3 480 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 LTB4R2Q9NPC1 389 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 PLK2Q9NYY3 685 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 CALCOCO1Q9P1Z2 691 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 STIM2Q9P246 746 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 OR12D3Q9UGF7 316 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 NDRG2Q9UN36 371 aaKnown RBP12.23□□□□□ -0.45
SNCA-202ENST00000345009 ADGRG1Q9Y653 693 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 HS3ST4Q9Y661 456 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.22□□□□□ -0.45
SNCA-202ENST00000345009 A0A0A6YYK5 440 aaPredicted RBP12.22□□□□□ -0.45
SNCA-202ENST00000345009 H0Y626 953 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 TIMM44O43615 452 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 SRGAP2O75044 1071 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 ATG13O75143 517 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 KAT7O95251 611 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 CD72P21854 359 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 SLC6A4P31645 630 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 HTR7P34969 479 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 TNFRSF4P43489 277 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 ZNF135P52742 658 aaPredicted RBP12.22□□□□□ -0.45
SNCA-202ENST00000345009 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
SNCA-202ENST00000345009 OGDHQ02218 1023 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 ZNF177Q13360 481 aaPredicted RBP12.22□□□□□ -0.45
SNCA-202ENST00000345009 CDH18Q13634 790 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 TCEAL1Q15170 157 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 TMEM196Q5HYL7 178 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 ERMARDQ5T6L9 678 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 FYB2Q5VWT5 728 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 NADSYN1Q6IA69 706 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 FBXL22Q6P050 247 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 RAD9BQ6WBX8 426 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 MFN1Q8IWA4 741 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 ETFBKMTQ8IXQ9 262 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 FBXL6Q8N531 539 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 PJA1Q8NG27 643 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
SNCA-202ENST00000345009 PLA2G2EQ9NZK7 142 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 XPO7Q9UIA9 1087 aaKnown RBP12.22□□□□□ -0.45
SNCA-202ENST00000345009 VANGL2Q9ULK5 521 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 USP18Q9UMW8 372 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 SLC27A6Q9Y2P4 619 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 MYOFQ9NZM1 2061 aa12.22□□□□□ -0.45
SNCA-202ENST00000345009 A0A0A0MRY4 1105 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 A0A1B0GVM2 712 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 TCAF2A6NFQ2 919 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 PRR33A8MZF0 331 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 GFRA2O00451 464 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 CLDN11O75508 207 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 MTA2O94776 668 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 PROSCO94903 275 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 MOCS3O95396 460 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 KRT7P08729 469 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 AOC1P19801 751 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 MIPP30301 263 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 L1CAMP32004 1257 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 MAN1A1P33908 653 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 OPRD1P41143 372 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 SLC1A1P43005 524 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 SLC6A11P48066 632 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 VAV2P52735 878 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 ATXN1P54253 815 aaKnown RBP12.21□□□□□ -0.45
SNCA-202ENST00000345009 CDH4P55283 916 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 RPS24P62847 133 aaKnown RBP12.21□□□□□ -0.45
SNCA-202ENST00000345009 NRG1Q02297 640 aaPredicted RBP12.21□□□□□ -0.45
SNCA-202ENST00000345009 SLC12A1Q13621 1099 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 MESDQ14696 234 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 ODF2Q5BJF6 829 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 SWT1Q5T5J6 900 aaKnown RBP12.21□□□□□ -0.45
SNCA-202ENST00000345009 TXNDC11Q6PKC3 985 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 CHST9Q7L1S5 443 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 TMEM139Q8IV31 216 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 CARNMT1Q8N4J0 409 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 FIBINQ8TAL6 211 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 UCMAQ8WVF2 138 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 CHFRQ96EP1 664 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 IER2Q9BTL4 223 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 TSGA10Q9BZW7 698 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 FOXQ1Q9C009 403 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 TRIM7Q9C029 511 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 LMAN1LQ9HAT1 526 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 KIAA1522Q9P206 1035 aaPredicted RBP12.21□□□□□ -0.45
SNCA-202ENST00000345009 PPARGC1AQ9UBK2 798 aaKnown RBP12.21□□□□□ -0.45
SNCA-202ENST00000345009 PCSK1NQ9UHG2 260 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 FBXO10Q9UK96 956 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 FZD10Q9ULW2 581 aa12.21□□□□□ -0.45
SNCA-202ENST00000345009 TICRRQ7Z2Z1 1910 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 E9PAM4 449 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 LRCH4O75427 683 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 LUC7L3O95232 432 aaKnown RBP12.2□□□□□ -0.46
SNCA-202ENST00000345009 HOXD9P28356 352 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms