RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 NAT10Q9H0A0 1025 aaKnown RBP20.73■□□□□ 0.91
CEACAM3-201ENST00000344550 VPS16Q9H269 839 aa20.73■□□□□ 0.91
CEACAM3-201ENST00000344550 TMEM9BQ9NQ34 198 aa20.73■□□□□ 0.91
CEACAM3-201ENST00000344550 WSB2Q9NYS7 404 aaPredicted RBP20.73■□□□□ 0.91
CEACAM3-201ENST00000344550 SUSD2Q9UGT4 822 aa20.73■□□□□ 0.91
CEACAM3-201ENST00000344550 STAP1Q9ULZ2 295 aa20.73■□□□□ 0.91
CEACAM3-201ENST00000344550 DCDC2BA2VCK2 349 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 MOCS2O96007 188 aaPredicted RBP20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 VASPP50552 380 aaPredicted RBP20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 TPMTP51580 245 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 SFSWAPQ12872 951 aaKnown RBP20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 TRIM61Q5EBN2 209 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 BRMS1LQ5PSV4 323 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 CHSY1Q86X52 802 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 LGI2Q8N0V4 545 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 EPS8L1Q8TE68 723 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 RNF34Q969K3 372 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 GANQ9H2C0 597 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 RXFP3Q9NSD7 469 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 STIM2Q9P246 746 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 SCML1Q9UN30 329 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 SLC6A14Q9UN76 642 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 CNOT1A5YKK6 2376 aaKnown RBP20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 GON4LQ3T8J9 2241 aa20.72■□□□□ 0.91
CEACAM3-201ENST00000344550 NCOR2Q9Y618 2525 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 A0A1B0GVM2 712 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 TCAF2A6NFQ2 919 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 H0Y626 953 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 SERPINF2P08697 491 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 PNMA6AP0CW24 399 aaPredicted RBP20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 ITPKAP23677 461 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 PLK1P53350 603 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 IRX4P78413 519 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 SULT2A1Q06520 285 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 TCEAL6Q6IPX3 200 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 TRIM72Q6ZMU5 477 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 SND1Q7KZF4 910 aaKnown RBP eCLIP20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 CARNMT1Q8N4J0 409 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 WFDC5Q8TCV5 224 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 DNASE2BQ8WZ79 361 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 TCEAL3Q969E4 200 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 NPY6RQ99463 290 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 SMOC1Q9H4F8 434 aa20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.71■□□□□ 0.91
CEACAM3-201ENST00000344550 TNRC6BQ9UPQ9 1833 aaKnown RBP20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 MED19A0JLT2 244 aaPredicted RBP20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 TARSL2A2RTX5 802 aaKnown RBP20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 LGALS16A8MUM7 142 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 GNSP15586 552 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 ZNF18P17022 549 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 SOX5P35711 763 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 CSKP41240 450 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 CXCR3P49682 368 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 COPB1P53618 953 aaKnown RBP20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 JAM2P57087 298 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 SLC25A52Q3SY17 297 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 C5orf22Q49AR2 442 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 RAP1GAP2Q684P5 730 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 NOP9Q86U38 636 aaKnown RBP20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 CYB5D2Q8WUJ1 264 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 TOE1Q96GM8 510 aaKnown RBP20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 ERGIC2Q96RQ1 377 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 TMEM74BQ9NUR3 256 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 XPO7Q9UIA9 1087 aaKnown RBP20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 SIK3Q9Y2K2 1263 aa20.7■□□□□ 0.9
CEACAM3-201ENST00000344550 M0QYT0 321 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 CDK11BP21127 795 aaKnown RBP20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 STAT1P42224 750 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 POLR2FP61218 127 aaKnown RBP20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 PITX1P78337 314 aaPredicted RBP20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 CDR2Q01850 454 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 GFPT1Q06210 699 aaPredicted RBP20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 HNRNPA1L2Q32P51 320 aaKnown RBP20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 PLEKHG6Q3KR16 790 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 PPM1JQ5JR12 505 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 PITRM1Q5JRX3 1037 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 XYLT1Q86Y38 959 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 SLC41A1Q8IVJ1 513 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 CFAP52Q8N1V2 620 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 MYEOVQ96EZ4 313 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 C1orf74Q96LT6 269 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 HSPA12BQ96MM6 686 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 SPAG5Q96R06 1193 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 BPIFA3Q9BQP9 254 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 SLC6A17Q9H1V8 727 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 WDCPQ9H6R7 721 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 CAPN10Q9HC96 672 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 PRSS16Q9NQE7 514 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 FAM207AQ9NSI2 230 aaPredicted RBP20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 NOCTQ9UK39 431 aaKnown RBP20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 INTS6Q9UL03 887 aaKnown RBP20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 SPTBN2O15020 2390 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 ITIH6Q6UXX5 1313 aa20.69■□□□□ 0.9
CEACAM3-201ENST00000344550 PI4KAP42356 2102 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 CDX4O14627 284 aaPredicted RBP20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 RNASEH1O60930 286 aaKnown RBP20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 CLDN11O75508 207 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 GRAP2O75791 330 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 SYPP08247 313 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 ADRB1P08588 477 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms