RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 NDUFS3O75489 264 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 RHOBTB1O94844 696 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 CPSF4O95639 269 aaKnown RBP7.97□□□□□ -1.13
KPNA1-201ENST00000344337 VAV1P15498 845 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 NCK1P16333 377 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ROR2Q01974 943 aaKnown RBP7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ZNF235Q14590 738 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 DEPDC1Q5TB30 811 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 IRGCQ6NXR0 463 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 FAM71AQ8IYT1 594 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 TMEM176AQ96HP8 235 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ACOX2Q99424 681 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 LRMDAQ9H2I8 198 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 SOX17Q9H6I2 414 aaPredicted RBP7.97□□□□□ -1.13
KPNA1-201ENST00000344337 KCNMB3Q9NPA1 279 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 SETD4Q9NVD3 440 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 KANSL1LA0AUZ9 987 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 FFAR3O14843 346 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 GPR42O15529 346 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 RPL10P27635 214 aaKnown RBP7.97□□□□□ -1.13
KPNA1-201ENST00000344337 CAP2P40123 477 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 CCNA1P78396 465 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 PGM5Q15124 567 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 TJAP1Q5JTD0 557 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 RNF43Q68DV7 783 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 FAM183BPQ6ZVS7 135 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ARMCX6Q7L4S7 300 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 AMIGO3Q86WK7 504 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 FAM47BQ8NA70 645 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ZNF317Q96PQ6 595 aaPredicted RBP7.97□□□□□ -1.13
KPNA1-201ENST00000344337 CPXM1Q96SM3 734 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ALG9Q9H6U8 611 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 POLR1BQ9H9Y6 1135 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 TRNAU1APQ9NX07 287 aaKnown RBP7.97□□□□□ -1.13
KPNA1-201ENST00000344337 USE1Q9NZ43 259 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ZMYM2Q9UBW7 1377 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 NEMP2A6NFY4 417 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 J3QRK9 145 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 TBX3O15119 743 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 HS6ST1O60243 411 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 THRAP10827 490 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 LRPAP1P30533 357 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 C21orf59P57076 290 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 PFKFB4Q16877 469 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 CLHC1Q8NHS4 586 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 CLEC4CQ8WTT0 213 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 SEPT1Q8WYJ6 367 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 FBXL8Q96CD0 374 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ZFP14Q9HCL3 533 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 THAP1Q9NVV9 213 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 TK2O00142 265 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ATP6V1G1O75348 118 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 CPB1P15086 417 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 ATP6V1E1P36543 226 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 GRIA4P48058 902 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 DLG1Q12959 904 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 INPP5AQ14642 412 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 CNPY1Q3B7I2 92 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 UAP1L1Q3KQV9 507 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 DPY19L2Q6NUT2 758 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 PIWIL2Q8TC59 973 aaKnown RBP7.97□□□□□ -1.13
KPNA1-201ENST00000344337 SLC2A14Q8TDB8 520 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 UTP15Q8TED0 518 aaKnown RBP7.97□□□□□ -1.13
KPNA1-201ENST00000344337 PRRG3Q9BZD7 231 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 SLC5A4Q9NY91 659 aa7.97□□□□□ -1.13
KPNA1-201ENST00000344337 TNS2Q63HR2 1409 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 KCNU1A8MYU2 1149 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 TMEM233B4DJY2 109 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 TFECO14948 347 aaPredicted RBP7.96□□□□□ -1.13
KPNA1-201ENST00000344337 CYP7B1O75881 506 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 NTRK1P04629 796 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 CHRNGP07510 517 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 LINC00032P0C843 101 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 VCLP18206 1134 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 HDCP19113 662 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 PBLDP30039 288 aaPredicted RBP7.96□□□□□ -1.13
KPNA1-201ENST00000344337 SERPINB8P50452 374 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 CHN2P52757 468 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 RBP5P82980 135 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 CCDC142Q17RM4 750 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 ZC3H12BQ5HYM0 836 aaKnown RBP7.96□□□□□ -1.13
KPNA1-201ENST00000344337 SLFN11Q7Z7L1 901 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 FLCNQ8NFG4 579 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 FBXO27Q8NI29 283 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 SH3GL1Q99961 368 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 COPS4Q9BT78 406 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 UBXN6Q9BZV1 441 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 MID1IP1Q9NPA3 183 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 EXD2Q9NVH0 621 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 HACL1Q9UJ83 578 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 TBC1D4O60343 1298 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 CKMT2P17540 419 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 CYP2B6P20813 491 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 HOXD13P35453 343 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 MARK2Q7KZI7 788 aaKnown RBP7.96□□□□□ -1.13
KPNA1-201ENST00000344337 PIGWQ7Z7B1 504 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 KCNMB4Q86W47 210 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 ALLCQ8N6M5 410 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 ZNF555Q8NEP9 628 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 UBASH3BQ8TF42 649 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms