RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NPR3P17342 541 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ME2P23368 584 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 WDR4P57081 412 aaKnown RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 PLIN5Q00G26 463 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 PLOD1Q02809 727 aaPredicted RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 NAB1Q13506 487 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ZC3H3Q8IXZ2 948 aaKnown RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 LRRC52Q8N7C0 313 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ACMSDQ8TDX5 336 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 PYDC1Q8WXC3 89 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ZNF516Q92618 1163 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 DDX50Q9BQ39 737 aaKnown RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 PHACTR1Q9C0D0 580 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 NMUR2Q9GZQ4 415 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 DMAP1Q9NPF5 467 aaPredicted RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 SPEF2Q9C093 1822 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ZMYM2Q9UBW7 1377 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 PRPF4O43172 522 aaKnown RBP eCLIP7.35□□□□□ -1.23
VCAN-202ENST00000342785 CLPTM1O96005 669 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ATP5BP06576 529 aaKnown RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 ITGA2BP08514 1039 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 NFKB1P19838 968 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 TREML2Q5T2D2 321 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 IQSEC1Q6DN90 963 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ANKS1BQ7Z6G8 1248 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 TINF2Q9BSI4 451 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ARL8BQ9NVJ2 186 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 BTBD7Q9P203 1132 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ZNF212Q9UDV6 495 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 TRMT6Q9UJA5 497 aaKnown RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 PACSIN3Q9UKS6 424 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 PCDHGC3Q9UN70 934 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 PCDHGB4Q9UN71 923 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 VPS9D1Q9Y2B5 631 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 VPS26AO75436 327 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 MATKP42679 507 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 MFSD10Q14728 455 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 DRICH1Q6PGQ1 229 aaPredicted RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 TTC33Q6PID6 262 aaPredicted RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 ZBTB49Q6ZSB9 765 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 BHMTQ93088 406 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 P2RY11Q96G91 374 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 SMARCD1Q96GM5 515 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ZNF333Q96JL9 665 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 APOL5Q9BWW9 433 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 CASZ1Q86V15 1759 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 UPP2O95045 317 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 BDNFP23560 247 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 GRM5P41594 1212 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 SNX17Q15036 470 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 GRAMD4Q6IC98 578 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 CMC1Q7Z7K0 106 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 GDPD5Q8WTR4 605 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ACE2Q9BYF1 805 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 RNPEPQ9H4A4 650 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 SYTL2Q9HCH5 934 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 MYO1DO94832 1006 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 VNN1O95497 513 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 SERPINF2P08697 491 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 RAG1P15918 1043 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ATP4AP20648 1035 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ICAM3P32942 547 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 RPL14P50914 215 aaKnown RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 CTXN3Q4LDR2 81 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 PACS1Q6VY07 963 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 SLC4A11Q8NBS3 891 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 CINPQ9BW66 212 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 PRDM16Q9HAZ2 1276 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 OLA1Q9NTK5 396 aaKnown RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 NALCNQ8IZF0 1738 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 NCF1BA6NI72 391 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 C2orf81A6NN90 581 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 NCF1CA8MVU1 366 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 LYPLA1O75608 230 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 GLP2RO95838 553 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 TPBGLP0DKB5 382 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 NCF1P14598 390 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 MAP4P27816 1152 aaKnown RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 HOXD10P28358 340 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 FOXN2P32314 431 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 SLC11A2P49281 568 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 PSEN2P49810 448 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 PKNOX1P55347 436 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ADGRD1Q6QNK2 874 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 TSHZ1Q6ZSZ6 1077 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 TNS4Q8IZW8 715 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ZNF786Q8N393 782 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 B3GALNT2Q8NCR0 500 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 IL22Q9GZX6 179 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 TRPC7Q9HCX4 862 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 TBC1D13Q9NVG8 400 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 DSEQ9UL01 958 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 C16orf96A6NNT2 1141 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 H0YGN5 161 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 CLASP2O75122 1294 aaKnown RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 ZMPSTE24O75844 475 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ASMTLO95671 621 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 PSMC3P17980 439 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 PSMA4P25789 261 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms