RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 LUZP2Q86TE4 346 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 VSIG10LQ86VR7 867 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 FBXO25Q8TCJ0 367 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 PIH1D1Q9NWS0 290 aaKnown RBP15.32■□□□□ 0.04
UBE3B-202ENST00000342494 GAKO14976 1311 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 MOXD2PA6NHM9 499 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 PIK3CDO00329 1044 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 TLL1O43897 1013 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 SP100P23497 879 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-202ENST00000342494 C16orf72Q14CZ0 275 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 TMEM119Q4V9L6 283 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 GRTP1Q5TC63 336 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 ARHGAP17Q68EM7 881 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 LRRC34Q8IZ02 419 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 CLYBLQ8N0X4 340 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 KCNA3P22001 575 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 CHKAP35790 457 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 USP41Q3LFD5 358 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 PDPK2PQ6A1A2 396 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 CAPRIN2Q6IMN6 1127 aaKnown RBP15.31■□□□□ 0.04
UBE3B-202ENST00000342494 VAT1Q99536 393 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 SOHLH2Q9NX45 425 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 FAM50BQ9Y247 325 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 HACD1B0YJ81 288 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 C1QTNF3-AMACRE9PGA6 284 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 ENO2P09104 434 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-202ENST00000342494 CNPP09543 421 aaKnown RBP15.31■□□□□ 0.04
UBE3B-202ENST00000342494 CSH1P0DML2 217 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 CSH2P0DML3 217 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 MARSP56192 900 aaKnown RBP15.31■□□□□ 0.04
UBE3B-202ENST00000342494 SNRPD1P62314 119 aaKnown RBP15.31■□□□□ 0.04
UBE3B-202ENST00000342494 PRR23CQ6ZRP0 262 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 MARK2Q7KZI7 788 aaKnown RBP15.31■□□□□ 0.04
UBE3B-202ENST00000342494 UNC93AQ86WB7 457 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 MAGEB18Q96M61 343 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 SHOC2Q9UQ13 582 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 CYP3A4P08684 503 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 CRABP2P29373 138 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 HSPA13P48723 471 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 SPANXN3Q5MJ09 141 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 APBB2Q92870 758 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 USP7Q93009 1102 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 DEPDC7Q96QD5 511 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 ARHGAP20Q9P2F6 1191 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 LZTS1Q9Y250 596 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 RIMS1Q86UR5 1692 aaKnown RBP15.31■□□□□ 0.04
UBE3B-202ENST00000342494 MST1RQ04912 1400 aa15.31■□□□□ 0.04
UBE3B-202ENST00000342494 PRLRP16471 622 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 NOS3P29474 1203 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 KLC1Q07866 573 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 MILR1Q7Z6M3 343 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 ZNF655Q8N720 491 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-202ENST00000342494 POMGNT2Q8NAT1 580 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 DNAJC9Q8WXX5 260 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 RERGLQ9H628 205 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 ANKRD63C9JTQ0 380 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 SCAMP3O14828 347 aaKnown RBP15.3■□□□□ 0.04
UBE3B-202ENST00000342494 SEC22BO75396 215 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 PPM1AP35813 382 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 ELK3P41970 407 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 GPR15P49685 360 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 AGKQ53H12 422 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 DNAAF5Q86Y56 855 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 OR56A4Q8NGH8 313 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 WNT8BQ93098 351 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 VPS33AQ96AX1 596 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 DEFB118Q96PH6 123 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 AASDHPPTQ9NRN7 309 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 STK39Q9UEW8 545 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 POLR1DQ9Y2S0 133 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 SNX13Q9Y5W8 968 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 BTN3A1O00481 513 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 FMO4P31512 558 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 CCT8P50990 548 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 FKBP1BP68106 108 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 KCNT2Q6UVM3 1135 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 COLGALT2Q8IYK4 626 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 HES2Q9Y543 173 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 USP32Q8NFA0 1604 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 hCG_2014768A0A024R1R8 64 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 FAM220BPB1ANY3 271 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 NFICP08651 508 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 MIPP30301 263 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 NOS2P35228 1153 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 VAC14Q08AM6 782 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 TOMM20Q15388 145 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 CRY1Q16526 586 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 RAP1GAP2Q684P5 730 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 CYP20A1Q6UW02 462 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 ATG16L2Q8NAA4 619 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 METTL6Q8TCB7 284 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 CYP1A1P04798 512 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-202ENST00000342494 CCND1P24385 295 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 NWD1Q149M9 1564 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 ZNF786Q8N393 782 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 FNDC5Q8NAU1 212 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 PIK3R5Q8WYR1 880 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 NFKBIL1Q9UBC1 381 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-202ENST00000342494 TNFSF13BQ9Y275 285 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms