RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 WDR41Q9HAD4 459 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 HMG20AQ9NP66 347 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 SUCOQ9UBS9 1254 aaKnown RBP18.96■□□□□ 0.63
SMPD1-201ENST00000342245 SLX4Q8IY92 1834 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 C1orf232A0A0U1RR37 186 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 CXorf49A8MYA2 514 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-201ENST00000342245 PLIN3O60664 434 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 GMNNO75496 209 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 ADRB2P07550 413 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 RHDQ02161 417 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 PMS2P3Q13401 168 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 ART3Q13508 389 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 BMPR2Q13873 1038 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 PPP2R2DQ66LE6 453 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 FAM117BQ6P1L5 589 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 GADL1Q6ZQY3 521 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 SIAEQ9HAT2 523 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 C8orf4Q9NR00 106 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 CLDN25C9JDP6 229 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 SLC22A1O15245 554 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 KLHL41O60662 606 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 CHEK2O96017 543 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 EIF3EP60228 445 aaKnown RBP18.95■□□□□ 0.62
SMPD1-201ENST00000342245 TMEM26Q6ZUK4 368 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 TMCO5AQ8N6Q1 288 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 COG4Q9H9E3 785 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 PCDHB12Q9Y5F1 795 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 FAM159BA6NKW6 160 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 TMX2-CTNND1H3BSU7 103 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 S100BP04271 92 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-201ENST00000342245 CALB1P05937 261 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 RALBP11234 206 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 NELFEP18615 380 aaKnown RBP18.95■□□□□ 0.62
SMPD1-201ENST00000342245 OSBPP22059 807 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 SLC7A1P30825 629 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 SLC16A2P36021 539 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 GTF2BQ00403 316 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 TRAP1Q12931 704 aaKnown RBP18.95■□□□□ 0.62
SMPD1-201ENST00000342245 TUBA3CQ13748 450 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 TIGD2Q4W5G0 525 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 C2CD6Q53TS8 623 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 ZBTB49Q6ZSB9 765 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 UNC45BQ8IWX7 931 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 USP33Q8TEY7 942 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 SMARCAD1Q9H4L7 1026 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 GPN2Q9H9Y4 310 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-201ENST00000342245 POPDC2Q9HBU9 364 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 TCF7L2Q9NQB0 619 aa18.95■□□□□ 0.62
SMPD1-201ENST00000342245 CST8O60676 142 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 KRT7P08729 469 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 C7P10643 843 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 PSMD8P48556 350 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 YWHAZP63104 245 aaKnown RBP18.94■□□□□ 0.62
SMPD1-201ENST00000342245 OCA2Q04671 838 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 PCLAFQ15004 111 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 N4BP2L1Q5TBK1 243 aaPredicted RBP18.94■□□□□ 0.62
SMPD1-201ENST00000342245 IFNLR1Q8IU57 520 aaPredicted RBP18.94■□□□□ 0.62
SMPD1-201ENST00000342245 CPNE9Q8IYJ1 553 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 RAB2BQ8WUD1 216 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 S100ZQ8WXG8 99 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 POLR1BQ9H9Y6 1135 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 CD320Q9NPF0 282 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 DUS2Q9NX74 493 aaKnown RBP18.94■□□□□ 0.62
SMPD1-201ENST00000342245 VPS51Q9UID3 782 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 SERPINA10Q9UK55 444 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 PACSIN3Q9UKS6 424 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 BTDP43251 543 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 KRT76Q01546 638 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 CNTN2Q02246 1040 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 GNA12Q03113 381 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 TAZQ16635 292 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 MROH9Q5TGP6 573 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 NEK10Q6ZWH5 1172 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 DAW1Q8N136 415 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 ELMOD1Q8N336 334 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 CNTD1Q8N815 330 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 KCNQ5Q9NR82 932 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 PRELID1Q9Y255 219 aa18.94■□□□□ 0.62
SMPD1-201ENST00000342245 GOLGA8QA0A0J9YX86 632 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 GOLGA8OA6NCC3 632 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 C3orf70A6NLC5 250 aaPredicted RBP18.93■□□□□ 0.62
SMPD1-201ENST00000342245 GOLGA8NF8WBI6 632 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 MYO1DO94832 1006 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 CHRNB1P11230 501 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 MX2P20592 715 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 VWA5B1Q5TIE3 1220 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 CYS1Q717R9 158 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 FAM71DQ8N9W8 422 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 PDZD8Q8NEN9 1154 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 LRTOMTQ8WZ04 291 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 ATP6V1E2Q96A05 226 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 PBXIP1Q96AQ6 731 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 NACC2Q96BF6 587 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 FAF2Q96CS3 445 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 NRBF2Q96F24 287 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 ADAMTS10Q9H324 1103 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 SACM1LQ9NTJ5 587 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 TBC1D22BQ9NU19 505 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 NXF1Q9UBU9 619 aaKnown RBP18.93■□□□□ 0.62
SMPD1-201ENST00000342245 SRP68Q9UHB9 627 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms