RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 DPF3Q92784 378 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CD101Q93033 1021 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 E2F7Q96AV8 911 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ELMO3Q96BJ8 720 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ASIC4Q96FT7 647 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF560Q96MR9 790 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 C1orf50Q9BV19 199 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ACAT2Q9BWD1 397 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 EHMT1Q9H9B1 1298 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CPSF3Q9UKF6 684 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 SNX13Q9Y5W8 968 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 A0A0B4J269 797 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 SAC3D1A6NKF1 404 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 H0Y858 1186 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 M0QX08 132 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 TK2O00142 265 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 FSCN2O14926 492 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 RNMTO43148 476 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF254O75437 659 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 KRT8P05787 483 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 RALAP11233 206 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 EEF1B2P24534 225 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 ARHGDIAP52565 204 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 VAC14Q08AM6 782 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 GALNT1Q10472 559 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 SMARCB1Q12824 385 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 GPS1Q13098 491 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 TUBB3Q13509 450 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 AQP6Q13520 282 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 POU6F1Q14863 301 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 PFKFB3Q16875 520 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 Q5BKY6 102 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 FRA10AC1Q70Z53 315 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 ANKS1BQ7Z6G8 1248 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 CRLF3Q8IUI8 442 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 PSMA8Q8TAA3 256 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 MCMBPQ9BTE3 642 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 MUC3BQ9H195 1237 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 RMND5AQ9H871 391 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 PAQR5Q9NXK6 330 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 VANGL2Q9ULK5 521 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 PDHXO00330 501 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 NRP1O14786 923 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 TSPAN4O14817 238 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 HTRA2O43464 458 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 IFNB1P01574 187 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 ALOX5P09917 674 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 TMEM191BP0C7N4 346 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 DHRS4L1P0CG22 281 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 PSMC2P35998 433 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 LSM3P62310 102 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 CCNA1P78396 465 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 STX3Q13277 289 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 BMPR2Q13873 1038 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 C11orf63Q6NUN7 778 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 KCTD20Q7Z5Y7 419 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 ADGRG5Q8IZF4 528 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF564Q8TBZ8 553 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 ELMO1Q92556 727 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF347Q96SE7 839 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 MCCC2Q9HCC0 563 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 TIGARQ9NQ88 270 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 THG1LQ9NWX6 298 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 ACTR3BQ9P1U1 418 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 UBA2Q9UBT2 640 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 DNMT3LQ9UJW3 386 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 TRPC5Q9UL62 973 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 DNM3Q9UQ16 869 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 MAN2B2Q9Y2E5 1009 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 AXIN2Q9Y2T1 843 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 AP3M1Q9Y2T2 418 aa9.88□□□□□ -0.83
PTCHD4-201ENST00000339488 RGPD5Q99666 1765 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 DYRK3O43781 588 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 MAN1A2O60476 641 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 XYLBO75191 536 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 GPC4O75487 556 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 C8BP07358 591 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TRIM49P0CI25 452 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TRIM49CP0CI26 452 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ENO3P13929 434 aaPredicted RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 OR3A3P47888 321 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 HSPA13P48723 471 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ATP6V0D1P61421 351 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 RHAGQ02094 409 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF846Q147U1 533 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ZMYND11Q15326 602 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 PAGE2BQ5JRK9 111 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 CLVS2Q5SYC1 327 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 BROXQ5VW32 411 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 MAVSQ7Z434 540 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 CELF2-AS1Q8N7Q2 184 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ANGPTL6Q8NI99 470 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ETNPPLQ8TBG4 499 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 BCL7CQ8WUZ0 217 aaPredicted RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 DCAKDQ8WVC6 231 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TRIB2Q92519 343 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 RAD54LQ92698 747 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 VPS33AQ96AX1 596 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 GIMAP5Q96F15 307 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms