RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 MND1Q9BWT6 205 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 BTBD2Q9BX70 525 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 UPF3AQ9H1J1 476 aaKnown RBP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 DBNDD1Q9H9R9 158 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 MRM3Q9HC36 420 aaKnown RBP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 MAT2BQ9NZL9 334 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 PI4KBQ9UBF8 816 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 DUSP12Q9UNI6 340 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 PPP2R3BQ9Y5P8 575 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 NFAT5O94916 1531 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 ADGRA2Q96PE1 1338 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 A0A0D9SFI3 127 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 HMX3A6NHT5 357 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 PLD2O14939 933 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 SYNCRIPO60506 623 aaKnown RBP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 DTNBO60941 627 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 MED26O95402 600 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 ENO1P06733 434 aaKnown RBP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 JUNBP17275 347 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 ZAP70P43403 619 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 LEPRP48357 1165 aaKnown RBP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 PLIN5Q00G26 463 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 TFDP1Q14186 410 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 ASTE1Q2TB18 679 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF792Q3KQV3 632 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 SNAP47Q5SQN1 464 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 ELP2Q6IA86 826 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 RALGPS2Q86X27 583 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 RAB43Q86YS6 212 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 SLC9A9Q8IVB4 645 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 SCUBE3Q8IX30 993 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 TIGD4Q8IY51 512 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 SLC15A4Q8N697 577 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 HDAC11Q96DB2 347 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 SERPINB11Q96P15 392 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 GCNAQ96QF7 691 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 GMLQ99445 158 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 ANKRD60Q9BZ19 345 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 BMP2KQ9NSY1 1161 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-201ENST00000338963 DNAJC28Q9NX36 388 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 PHF11Q9UIL8 331 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 NAALADL1Q9UQQ1 740 aa4.25□□□□□ -1.73
NEDD4-201ENST00000338963 TMEM238LA0A1B0GVL6 79 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 CAPN8A6NHC0 703 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 FAM170BA6NMN3 283 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 LOC110117498-PIK3R3F6TDL0 507 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 STAU1O95793 577 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 MT-ND3P03897 115 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 NPY2RP49146 381 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 KCNQ4P56696 695 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 NFATC3Q12968 1075 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ZC3H12BQ5HYM0 836 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 GRTP1Q5TC63 336 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 KANK2Q63ZY3 851 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 NANOGP8Q6NSW7 305 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 MS4A14Q96JA4 679 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 AK8Q96MA6 479 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PDCD10Q9BUL8 212 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 BIN3Q9NQY0 253 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 IL37Q9NZH6 218 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PGAP2Q9UHJ9 254 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 CDC42BPGQ6DT37 1551 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ARHGEF5Q12774 1597 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 CCDC163A0A0D9SF12 145 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ZBBXA8MT70 800 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 H3BMQ9 156 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PI15O43692 258 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 NDUFS2O75306 463 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 HSMCR30P0CW71 290 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 GLULP15104 373 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 IFNAR1P17181 557 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 EIF2AK2P19525 551 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 POLR2BP30876 1174 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RPS5P46782 204 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 DGKQP52824 942 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PDK2Q15119 407 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 EPC2Q52LR7 807 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 C11orf63Q6NUN7 778 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 LETMD1Q6P1Q0 360 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 CRTC1Q6UUV9 634 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 IFNLR1Q8IU57 520 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RBFAQ8N0V3 343 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 LRRC47Q8N1G4 583 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ANKRD13CQ8N6S4 541 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 TESCQ96BS2 214 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 MAGEB10Q96LZ2 347 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 FAM227BQ96M60 508 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PANX3Q96QZ0 392 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RBM15Q96T37 977 aaKnown RBP eCLIP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 MTMR12Q9C0I1 747 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 GAREM1Q9H706 876 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 LRRC19Q9H756 370 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RC3H2Q9HBD1 1191 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PNPLA8Q9NP80 782 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ACTR3BQ9P1U1 418 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RIMKLBQ9ULI2 386 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PCDHGB4Q9UN71 923 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RPTORQ8N122 1335 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 C17orf113A0A1B0GUU1 675 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms