RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 FAM47BQ8NA70 645 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 HAPLN3Q96S86 360 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 C6orf203Q9P0P8 240 aaPredicted RBP16.42■□□□□ 0.22
NPHP3-201ENST00000337331 DNPEPQ9ULA0 475 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 H0Y626 953 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 SLURP2P0DP57 97 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 GLRBP48167 497 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 KIZQ2M2Z5 673 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 DCAF12L1Q5VU92 463 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 GALNT18Q6P9A2 607 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 ATG14Q6ZNE5 492 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 C1orf186Q6ZWK4 172 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 WDR49Q8IV35 697 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 MARCH7Q9H992 704 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 SLC30A1Q9Y6M5 507 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 MYH6P13533 1939 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 UGT1A9O60656 530 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 CAPN15O75808 1086 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 CRTAMO95727 393 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 UGT1A6P19224 532 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 UGT1A1P22309 533 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 UGT1A4P22310 534 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 UGT1A3P35503 534 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 UGT1A5P35504 534 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 RXRGP48443 463 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 PGM5Q15124 567 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 NBPF12Q5TAG4 269 aaPredicted RBP16.41■□□□□ 0.22
NPHP3-201ENST00000337331 IL31Q6EBC2 164 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 SLFN11Q7Z7L1 901 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 UGT1A7Q9HAW7 530 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 UGT1A10Q9HAW8 530 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 UGT1A8Q9HAW9 530 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 HMG20AQ9NP66 347 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 RAD23AP54725 363 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 RAD51Q06609 339 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 FUT2Q10981 343 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 FASTKD3Q14CZ7 662 aaKnown RBP16.41■□□□□ 0.22
NPHP3-201ENST00000337331 SPDYAQ5MJ70 313 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 CLEC4FQ8N1N0 589 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 ZBTB45Q96K62 511 aaPredicted RBP16.41■□□□□ 0.22
NPHP3-201ENST00000337331 KCTD10Q9H3F6 313 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 SLC38A7Q9NVC3 462 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 LGALS13Q9UHV8 139 aa16.41■□□□□ 0.22
NPHP3-201ENST00000337331 PHGDHO43175 533 aaKnown RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 ENO2P09104 434 aaPredicted RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 RPS12P25398 132 aaKnown RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 DLG4P78352 724 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 SNAPC2Q13487 334 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 NFIL3Q16649 462 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 ZFP1Q6P2D0 407 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 TMEM176AQ96HP8 235 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 PLEKHA8Q96JA3 519 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 NSMCE3Q96MG7 304 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 DEPDC7Q96QD5 511 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 OXCT2Q9BYC2 517 aaPredicted RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 WDCPQ9H6R7 721 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 CATSPERBQ9H7T0 1116 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 KIF17Q9P2E2 1029 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 PLA2G4CQ9UP65 541 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 AP4E1Q9UPM8 1137 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 V9GYQ6 96 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 RIC1Q4ADV7 1423 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 LINC00854A0A1B0GVQ3 168 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 CLOCKO15516 846 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 IDH3BO43837 385 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 KRT33BQ14525 404 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 TAF5Q15542 800 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 PLD3Q8IV08 490 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 C4orf32Q8N8J7 132 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 CITED4Q96RK1 184 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 PCDHGB4Q9UN71 923 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 COG5Q9UP83 839 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 PSMD11O00231 422 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 TADA2AO75478 443 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 SRP72O76094 671 aaKnown RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 SUPT7LO94864 414 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 CXCL9Q07325 125 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 BNIP3Q12983 259 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 MOGSQ13724 837 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 PTK2BQ14289 1009 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 FAM83EQ2M2I3 478 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 PABPC1LQ4VXU2 614 aaKnown RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 MFSD14CQ5VZR4 134 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 SNX32Q86XE0 403 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 GLMNQ92990 594 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 CHST12Q9NRB3 414 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 A0A087WZ62 844 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 B3GAT3O94766 335 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 VTNP04004 478 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 ME2P23368 584 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 NNMTP40261 264 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 PNPLA4P41247 253 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 CDH15P55291 814 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 GNA12Q03113 381 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 VEPH1Q14D04 833 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 GPRC5AQ8NFJ5 357 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 GAB3Q8WWW8 586 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms