RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MXRA8Q9BRK3 442 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 RTFDC1Q9BY42 306 aaPredicted RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 FBXO40Q9UH90 709 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 LDLRP01130 860 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 PENKP01210 267 aaPredicted RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 KDELR1P24390 212 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 CCND2P30279 289 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 PTPN7P35236 360 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 KPNA1P52294 538 aaPredicted RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 PRKAA1Q13131 559 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 NFIL3Q16649 462 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 IMPG1Q17R60 797 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 PPM1JQ5JR12 505 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 RNF149Q8NC42 400 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 OR7A2PQ8NGA2 310 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 KCNMB3Q9NPA1 279 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 XPNPEP1Q9NQW7 623 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 GIN1Q9NXP7 522 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 DRG1Q9Y295 367 aaKnown RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 PDZK1P1A8MUH7 402 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 CCNT2O60583 730 aaKnown RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 SERPINI2O75830 405 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 HSMCR30P0CW71 290 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 MUTP22033 750 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 GP5P40197 560 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 RARRES1P49788 294 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 PDCD4Q53EL6 469 aaKnown RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 FAM160B2Q86V87 743 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 P3H2Q8IVL5 708 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 C12orf50Q8NA57 414 aaPredicted RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 IPMKQ8NFU5 416 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 OMDQ99983 421 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 GPRC5DQ9NZD1 345 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 ITGA11Q9UKX5 1188 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 A0A1W2PPW3 197 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 KCNK1O00180 336 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 DGAT1O75907 488 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 OAS1P00973 400 aaKnown RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 TSPAN8P19075 237 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 CHRNB3Q05901 458 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 CSHL1Q14406 222 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 MIER2Q8N344 545 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 C7orf26Q96N11 449 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 THUMPD3Q9BV44 507 aaKnown RBP13.53□□□□□ -0.24
COL2A1-201ENST00000337299 ADAMTS6Q9UKP5 1117 aa13.53□□□□□ -0.24
COL2A1-201ENST00000337299 STX16-NPEPL1H3BU86 382 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 APOC4-APOC2K7ER74 178 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 SEC24AO95486 1093 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 APOC2P02655 101 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 HMGCRP04035 888 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 PCNAP12004 261 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 CRABP2P29373 138 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 CCNG1P51959 295 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 TSTA3Q13630 321 aaPredicted RBP13.52□□□□□ -0.24
COL2A1-201ENST00000337299 PCSK7Q16549 785 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.24
COL2A1-201ENST00000337299 NAT16Q8N8M0 369 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 RORBQ92753 470 aa13.52□□□□□ -0.24
COL2A1-201ENST00000337299 ZNF70Q9UC06 446 aaPredicted RBP13.52□□□□□ -0.24
COL2A1-201ENST00000337299 NADKO95544 446 aaPredicted RBP13.52□□□□□ -0.25
COL2A1-201ENST00000337299 TOP3BO95985 862 aaKnown RBP13.52□□□□□ -0.25
COL2A1-201ENST00000337299 ITGAVP06756 1048 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 XRCC1P18887 633 aaPredicted RBP13.52□□□□□ -0.25
COL2A1-201ENST00000337299 ALDH4A1P30038 563 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 HALP42357 657 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 GCNT1Q02742 428 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 Q3C1V9 767 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 PTPN20Q4JDL3 420 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 AASDHQ4L235 1098 aaPredicted RBP13.52□□□□□ -0.25
COL2A1-201ENST00000337299 PAOXQ6QHF9 649 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 ABRAXAS1Q6UWZ7 409 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 ARCQ7LC44 396 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 ERI1Q8IV48 349 aaKnown RBP13.52□□□□□ -0.25
COL2A1-201ENST00000337299 SPATA6LQ8N4H0 392 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 COLGALT1Q8NBJ5 622 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 TFB1MQ8WVM0 346 aaKnown RBP13.52□□□□□ -0.25
COL2A1-201ENST00000337299 FAM162AQ96A26 154 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 C9orf16Q9BUW7 83 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 NCKIPSDQ9NZQ3 722 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 AMHP03971 560 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 MPSTP25325 297 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 SFNP31947 248 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 TTKP33981 857 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 RPL14P50914 215 aaKnown RBP13.52□□□□□ -0.25
COL2A1-201ENST00000337299 GTF2A2P52657 109 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 BOLA3Q53S33 107 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 DPP9Q86TI2 863 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 ZFPM1Q8IX07 1006 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 ZBTB45Q96K62 511 aaPredicted RBP13.52□□□□□ -0.25
COL2A1-201ENST00000337299 RNF146Q9NTX7 359 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 NOD1Q9Y239 953 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 ACOT9Q9Y305 439 aa13.52□□□□□ -0.25
COL2A1-201ENST00000337299 C3P01024 1663 aa13.51□□□□□ -0.25
COL2A1-201ENST00000337299 DFFAO00273 331 aa13.51□□□□□ -0.25
COL2A1-201ENST00000337299 TRIM38O00635 465 aa13.51□□□□□ -0.25
COL2A1-201ENST00000337299 SNPHO15079 494 aa13.51□□□□□ -0.25
COL2A1-201ENST00000337299 H6PDO95479 791 aa13.51□□□□□ -0.25
COL2A1-201ENST00000337299 MYL4P12829 197 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms