RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TRIM8Q9BZR9 551 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.4
FN1-202ENST00000336916 SH3BP4Q9P0V3 963 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 CACNA1CQ13936 2221 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.52□□□□□ -0.4
FN1-202ENST00000336916 SLC15A5A6NIM6 579 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 PAICSP22234 425 aaKnown RBP12.52□□□□□ -0.4
FN1-202ENST00000336916 KELP23276 732 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 CDH9Q9ULB4 789 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 RAD51CO43502 376 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 PROSCO94903 275 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 FTH1P02794 183 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 DGKAP23743 735 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 SETD9Q8NE22 299 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 SLC27A6Q9Y2P4 619 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 PCDHA3Q9Y5H8 950 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 NOS2P35228 1153 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 SVOPQ8N4V2 548 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 PLSCR1O15162 318 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 SLC2A4P14672 509 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 NR6A1Q15406 480 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 LONP2Q86WA8 852 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 ARHGAP28Q9P2N2 729 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 FOXN3O00409 490 aaPredicted RBP12.52□□□□□ -0.41
FN1-202ENST00000336916 NFICP08651 508 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 CSH1P0DML2 217 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 CSH2P0DML3 217 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 SMIM11AP58511 58 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 PKN1Q16512 942 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 WDR93Q6P2C0 686 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 MAML3Q96JK9 1138 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 FAM126AQ9BYI3 521 aaPredicted RBP12.52□□□□□ -0.41
FN1-202ENST00000336916 DDX28Q9NUL7 540 aaKnown RBP12.52□□□□□ -0.41
FN1-202ENST00000336916 MRTO4Q9UKD2 239 aaKnown RBP12.52□□□□□ -0.41
FN1-202ENST00000336916 TSPAN16Q9UKR8 245 aa12.52□□□□□ -0.41
FN1-202ENST00000336916 ARIH1Q9Y4X5 557 aaPredicted RBP12.52□□□□□ -0.41
FN1-202ENST00000336916 SLC37A4O43826 429 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 FKBP6O75344 327 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 PGAM1P18669 254 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 VHLP40337 213 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 MMP13P45452 471 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 KIAA2013Q8IYS2 634 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 DERAQ9Y315 318 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 CASTOR2A6NHX0 329 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 SCNN1BP51168 640 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 XRCC4Q13426 336 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 RBM43Q6ZSC3 357 aaKnown RBP12.51□□□□□ -0.41
FN1-202ENST00000336916 MICU2Q8IYU8 434 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 RXFP2Q8WXD0 754 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 RBM12Q9NTZ6 932 aaKnown RBP12.51□□□□□ -0.41
FN1-202ENST00000336916 THAP1Q9NVV9 213 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 MARCH2Q9P0N8 246 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 PDP2Q9P2J9 529 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 E9PBE3 544 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 WNT10BO00744 389 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 XPO1O14980 1071 aaKnown RBP12.51□□□□□ -0.41
FN1-202ENST00000336916 HTR7P34969 479 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 COPZ1P61923 177 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 PLOD1Q02809 727 aaPredicted RBP12.51□□□□□ -0.41
FN1-202ENST00000336916 CEP78Q5JTW2 689 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 ILDR2Q71H61 639 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 MSL3Q8N5Y2 521 aaKnown RBP12.51□□□□□ -0.41
FN1-202ENST00000336916 RP9Q8TA86 221 aaKnown RBP12.51□□□□□ -0.41
FN1-202ENST00000336916 ZNF473Q8WTR7 871 aaKnown RBP12.51□□□□□ -0.41
FN1-202ENST00000336916 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 SNX6Q9UNH7 406 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 PDZK1P1A8MUH7 402 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 TDRD5Q8NAT2 981 aaKnown RBP12.51□□□□□ -0.41
FN1-202ENST00000336916 HELQQ8TDG4 1101 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 ERP27Q96DN0 273 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 RRAGCQ9HB90 399 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 KIAA1217Q5T5P2 1943 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 STX4Q12846 297 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 PTPN21Q16825 1174 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 ARHGAP17Q68EM7 881 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 PROX1Q92786 737 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 FAIM2Q9BWQ8 316 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 RNF208Q9H0X6 261 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 FKTNO75072 461 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 TUBP50607 506 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 PMF1Q6P1K2 205 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 FBXO39Q8N4B4 442 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 C9orf72Q96LT7 481 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 RACGAP1Q9H0H5 632 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
FN1-202ENST00000336916 LRRC14BA6NHZ5 514 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 KLHL41O60662 606 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 AVILO75366 819 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 CAPN15O75808 1086 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 MLYCDO95822 493 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 CDC25CP30307 473 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 IFNEQ86WN2 208 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 PDLIM2Q96JY6 352 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 S100A13Q99584 98 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 MEGF6O75095 1541 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
FN1-202ENST00000336916 IL2P60568 153 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms