RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 FAM50BQ9Y247 325 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 ATXN2Q99700 1313 aaKnown RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 IGLV3-10A0A075B6K4 115 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 SLC12A8A0AV02 714 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 FAM187AA6NFU0 413 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 SRRM3A6NNA2 597 aaPredicted RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 TJP3O95049 919 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 MBL2P11226 248 aaPredicted RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 AVPR1AP37288 418 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 NR2C2P49116 596 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 OXCT1P55809 520 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 ZNF33AQ06730 810 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 DHX9Q08211 1270 aaKnown RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 NME3Q13232 169 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 ADGRE1Q14246 886 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 HABP4Q5JVS0 413 aaKnown RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 GPR158Q5T848 1215 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 AGBL2Q5U5Z8 902 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 Q6ZNB5 142 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 ADAT2Q7Z6V5 191 aaKnown RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 CELF5Q8N6W0 485 aaKnown RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 SUSD6Q92537 303 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 SLC46A2Q9BY10 475 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 TRIM31Q9BZY9 425 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 TKTL2Q9H0I9 626 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 CATSPERBQ9H7T0 1116 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 CD207Q9UJ71 328 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 C2orf16Q68DN1 1984 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 A0A087WUV0 522 aaPredicted RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 C3orf70A6NLC5 250 aaPredicted RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 DRGXA6NNA5 263 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SOX1O00570 391 aaPredicted RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 ACSL4O60488 711 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 PHF2O75151 1096 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 IL1R2P27930 398 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 CHKAP35790 457 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 USP4Q13107 963 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SPDYCQ5MJ68 293 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 RARS2Q5T160 578 aaKnown RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 ADGRF1Q5T601 910 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 MANEALQ5VSG8 457 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SCYL2Q6P3W7 929 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 DRICH1Q6PGQ1 229 aaPredicted RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 ZNF783Q6ZMS7 281 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 GRASPQ7Z6J2 395 aaPredicted RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SPATS2Q86XZ4 545 aaKnown RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SMRP1Q8NCR6 262 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 ZFRQ96KR1 1074 aaKnown RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 ERP44Q9BS26 406 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SNRNP25Q9BV90 132 aaKnown RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 IGFLR1Q9H665 355 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 TDP1Q9NUW8 608 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 CDH7Q9ULB5 785 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 A0A1W2PRU2 124 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 NCAM2O15394 837 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 PPFIA2O75334 1257 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 STC2O76061 302 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 TGM2P21980 687 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 CDKN2BP42772 138 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SSR1P43307 286 aaKnown RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 MARCKSL1P49006 195 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 PGFP49763 221 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SMAD4Q13485 552 aaKnown RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 KRT81Q14533 505 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 CDO1Q16878 200 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 KCTD19Q17RG1 926 aaPredicted RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 ZC3H12AQ5D1E8 599 aaKnown RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 TMCO4Q5TGY1 634 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 RNF43Q68DV7 783 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 DUPD1Q68J44 220 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SPOCD1Q6ZMY3 1216 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 BBS12Q6ZW61 710 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 CHST9Q7L1S5 443 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 OTOP3Q7RTS5 596 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 JAMLQ86YT9 394 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 KRT35Q92764 455 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SMARCD2Q92925 531 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 FATE1Q969F0 183 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 PEBP4Q96S96 227 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 PRMT1Q99873 361 aaKnown RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 MAK16Q9BXY0 300 aaKnown RBP9.79□□□□□ -0.84
C11orf54-201ENST00000331239 RNF38Q9H0F5 515 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 PCDH18Q9HCL0 1135 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 EPS15L1Q9UBC2 864 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 SFMBT1Q9UHJ3 866 aa9.79□□□□□ -0.84
C11orf54-201ENST00000331239 TRANK1O15050 2925 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 KIF26AQ9ULI4 1882 aaPredicted RBP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 C2orf78A6NCI8 922 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 GFRA2O00451 464 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 PAGE1O75459 146 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CPP00450 1065 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 KRT1P04264 644 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CHRNA3P32297 505 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 LTBRP36941 435 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 DPYSL3Q14195 570 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 TEAD2Q15562 447 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 KRT71Q3SY84 523 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 TTC31Q49AM3 519 aaPredicted RBP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 RABGAP1LQ5R372 815 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 SH3PXD2AQ5TCZ1 1133 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms