RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 OASLQ15646 514 aaKnown RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 IL27RAQ6UWB1 636 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 PACS1Q6VY07 963 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 SCUBE1Q8IWY4 988 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 MRPL48Q96GC5 212 aaKnown RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 AGO4Q9HCK5 861 aaKnown RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 ENTPD4Q9Y227 616 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 PCDHB5Q9Y5E4 795 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 TMEM191CA6NGB0 347 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 SNTNA6NMZ2 147 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 NT5C1B-RDH14C9J2C7 533 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 KCNK1O00180 336 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 FFAR2O15552 330 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 RBMXL2O75526 392 aaKnown RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 VDRP11473 427 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 PEX5P50542 639 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 RNF19BQ6ZMZ0 732 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 AGMOQ6ZNB7 445 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 SUSD6Q92537 303 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 LPPQ93052 612 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 HGH1Q9BTY7 390 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 TKTL2Q9H0I9 626 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 LRRC40Q9H9A6 602 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 DSEQ9UL01 958 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 TAF6LQ9Y6J9 622 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 PNPLA7Q6ZV29 1317 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 A0A0A6YYK5 440 aaPredicted RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 SNPHO15079 494 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 ERN1O75460 977 aaKnown RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 MTAPQ13126 283 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 RASA2Q15283 850 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 ZNF484Q5JVG2 852 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 FBXO47Q5MNV8 452 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 SKA1Q96BD8 255 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 TMA7Q9Y2S6 64 aaKnown RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 CITO14578 2027 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 LOC100506127A0A0U1RQW1 187 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 ANKDD1BA6NHY2 528 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 TRIM3O75382 744 aaPredicted RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 PPATQ06203 517 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 STX5Q13190 355 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 PLPP4Q5VZY2 271 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 STYK1Q6J9G0 422 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 FAM45BPQ6NSW5 357 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 USP38Q8NB14 1042 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 NOA1Q8NC60 698 aaKnown RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 FEM1CQ96JP0 617 aa10.78□□□□□ -0.68
CLN8-201ENST00000331222 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.78□□□□□ -0.68
CLN8-201ENST00000331222 C1orf232A0A0U1RR37 186 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 FAM25EA8MYX2 175 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 ENTPD3O75355 529 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 RRM1P23921 792 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 ABRQ12979 859 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 SCIMPQ6UWF3 145 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 HHIPL2Q6UWX4 724 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 BNC2Q6ZN30 1099 aaPredicted RBP10.77□□□□□ -0.68
CLN8-201ENST00000331222 COL23A1Q86Y22 540 aaPredicted RBP10.77□□□□□ -0.68
CLN8-201ENST00000331222 DSELQ8IZU8 1212 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 FAM45AQ8TCE6 357 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 GTF3C2Q8WUA4 911 aaPredicted RBP10.77□□□□□ -0.68
CLN8-201ENST00000331222 COQ7Q99807 217 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 HMX1Q9NP08 348 aaPredicted RBP10.77□□□□□ -0.68
CLN8-201ENST00000331222 A1CFQ9NQ94 594 aaKnown RBP10.77□□□□□ -0.68
CLN8-201ENST00000331222 A0A1B0GTH6 734 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 FFAR3O14843 346 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 TRIM24O15164 1050 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 RAD51BO15315 384 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 GPR42O15529 346 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 OR56A5P0C7T3 313 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 PABPC1P11940 636 aaKnown RBP10.77□□□□□ -0.68
CLN8-201ENST00000331222 MYL12AP19105 171 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 NPY2RP49146 381 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 ADAM2Q99965 735 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 TRIT1Q9H3H1 467 aaKnown RBP10.77□□□□□ -0.68
CLN8-201ENST00000331222 EFCAB1Q9HAE3 211 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 KLHL28Q9NXS3 571 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 GULP1Q9UBP9 304 aa10.77□□□□□ -0.68
CLN8-201ENST00000331222 FARP2O94887 1054 aaPredicted RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 CTPS1P17812 591 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 WASP42768 502 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 EXOSC10Q01780 885 aaKnown RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 CENPCQ03188 943 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 CAMK1Q14012 370 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 CCNI2Q6ZMN8 369 aaPredicted RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 EID3Q8N140 333 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 OR6K2Q8NGY2 324 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 MIEF2Q96C03 454 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 KCNS3Q9BQ31 491 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 SYT15Q9BQS2 421 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 DGCR6LQ9BY27 220 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 NYAP2Q9P242 653 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 ZNF521Q96K83 1311 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 LACTBL1A8MY62 500 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 GTPBP1O00178 669 aaKnown RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 TBL1XO60907 577 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 KHDRBS3O75525 346 aaKnown RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 PDHA2P29803 388 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 GET4Q7L5D6 327 aaPredicted RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 KCNMB4Q86W47 210 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 ERO1BQ86YB8 467 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms