RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 C10orf107Q8IVU9 208 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 RIN3Q8TB24 985 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 ADAM28Q9UKQ2 775 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 ANKRD6Q9Y2G4 727 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 MYH3P11055 1940 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 GOT1P17174 413 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 AKAP5P24588 427 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 ACAT1P24752 427 aaKnown RBP15.06■□□□□ 0
TCOF1-201ENST00000323668 NOS2P35228 1153 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 CHN2P52757 468 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 ACSBG2Q5FVE4 666 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 RFWD3Q6PCD5 774 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 LCLAT1Q6UWP7 414 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 TTC7BQ86TV6 843 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 TNS4Q8IZW8 715 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 NIPA2Q8N8Q9 360 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 ADAM32Q8TC27 787 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 GTF3C2Q8WUA4 911 aaPredicted RBP15.06■□□□□ 0
TCOF1-201ENST00000323668 MPP4Q96JB8 637 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 VAT1Q99536 393 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 PNPOQ9NVS9 261 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 TJP2Q9UDY2 1190 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 PACSIN3Q9UKS6 424 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 TRPM3Q9HCF6 1732 aaPredicted RBP15.06■□□□□ 0
TCOF1-201ENST00000323668 TUBGCP6Q96RT7 1819 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 KLRG2A4D1S0 409 aaPredicted RBP15.06■□□□□ 0
TCOF1-201ENST00000323668 MT-CO1P00395 513 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 CCNHP51946 323 aaPredicted RBP15.06■□□□□ 0
TCOF1-201ENST00000323668 TAF5Q15542 800 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 KIAA0319LQ8IZA0 1049 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 PRPF18Q99633 342 aaKnown RBP15.06■□□□□ 0
TCOF1-201ENST00000323668 EGFL8Q99944 293 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 ELOVL4Q9GZR5 314 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 PPP2R3BQ9Y5P8 575 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 BCLAF3A2AJT9 711 aaKnown RBP15.06■□□□□ 0
TCOF1-201ENST00000323668 RGSL1A5PLK6 1076 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 SUPT3HB4E1H0 165 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 HDAC3O15379 428 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 SP100P23497 879 aaPredicted RBP15.06■□□□□ 0
TCOF1-201ENST00000323668 DNAJB2P25686 324 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 GBE1Q04446 702 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 PDK3Q15120 406 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 C1orf220Q5T0J3 134 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 WDR41Q9HAD4 459 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 SETD4Q9NVD3 440 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 CTSHP09668 335 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 PTPN7P35236 360 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 GRIK4Q16099 956 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 PPP1R26Q5T8A7 1209 aaPredicted RBP15.06■□□□□ 0
TCOF1-201ENST00000323668 RNF220Q5VTB9 566 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 TAS2R42Q7RTR8 314 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 EFCAB3Q8N7B9 438 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 ANKRD52Q8NB46 1076 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 DLG3Q92796 817 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 COPS5Q92905 334 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 WNT8BQ93098 351 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 RBM22Q9NW64 420 aaKnown RBP eCLIP15.06■□□□□ 04e-6■■■■□ 24.3
TCOF1-201ENST00000323668 RNF181Q9P0P0 153 aa15.06■□□□□ 0
TCOF1-201ENST00000323668 C16orf96A6NNT2 1141 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 CRABP2P29373 138 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 GPR141Q7Z602 305 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 C1orf127Q8N9H9 656 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 TMEM79Q9BSE2 394 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 IL22Q9GZX6 179 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 SDCBP2Q9H190 292 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 NKX1-2Q9UD57 310 aaPredicted RBP15.05■□□□□ 0
TCOF1-201ENST00000323668 USP1O94782 785 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 TPSB2P20231 275 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 RGS2P41220 211 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 TPSAB1Q15661 275 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 EDEM1Q92611 657 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 RRN3Q9NYV6 651 aa15.05■□□□□ 0
TCOF1-201ENST00000323668 TNPO2O14787 897 aaKnown RBP15.05■□□□□ -0
TCOF1-201ENST00000323668 PYGLP06737 847 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -09e-6■□□□□ 10.4
TCOF1-201ENST00000323668 KLF1Q13351 362 aaPredicted RBP15.05■□□□□ -0
TCOF1-201ENST00000323668 TIGD7Q6NT04 549 aaPredicted RBP15.05■□□□□ -0
TCOF1-201ENST00000323668 TSHZ1Q6ZSZ6 1077 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 CDC26Q8NHZ8 85 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 PHF21BQ96EK2 531 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 ACE2Q9BYF1 805 aaPredicted RBP15.05■□□□□ -0
TCOF1-201ENST00000323668 SNX15Q9NRS6 342 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 B3GAT3O94766 335 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 UPP2O95045 317 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 USP4Q13107 963 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 SIX1Q15475 284 aaPredicted RBP15.05■□□□□ -0
TCOF1-201ENST00000323668 KIAA1841Q6NSI8 718 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 MRNIPQ6NTE8 343 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 ARHGAP22Q7Z5H3 698 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 POPDC2Q9HBU9 364 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 CROTQ9UKG9 612 aa15.05■□□□□ -0
TCOF1-201ENST00000323668 SMIM31A0A1B0GVY4 71 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 GPX6P59796 221 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 HSDL1Q3SXM5 330 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 EFL1Q7Z2Z2 1120 aaKnown RBP15.04■□□□□ -0
TCOF1-201ENST00000323668 CMC1Q7Z7K0 106 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 ZNF410Q86VK4 478 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 ZNF570Q96NI8 536 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 KATNAL1Q9BW62 490 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 DDX18Q9NVP1 670 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms