RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 ZFP28Q8NHY6 868 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 TMIGD2Q96BF3 282 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 OR52B2Q96RD2 323 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 COPS7BQ9H9Q2 264 aaPredicted RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 CAB39LQ9H9S4 337 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 TMEM216Q9P0N5 145 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 PHF24Q9UPV7 400 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 LZTS1Q9Y250 596 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 TMX2-CTNND1H3BSU7 103 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 M0QYV0 167 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 PABPC4LP0CB38 370 aaKnown RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 SFNP31947 248 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 NKX3-2P78367 333 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 TRPC3Q13507 836 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 PCLAFQ15004 111 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 NOMO1Q15155 1222 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 HADHQ16836 314 aaKnown RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 CTU1Q7Z7A3 348 aaKnown RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 AMIGO2Q86SJ2 522 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 TRIM74Q86UV6 250 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 TRIM73Q86UV7 250 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 ZNF781Q8N8C0 355 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 ZSCAN18Q8TBC5 510 aaPredicted RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 PIWIL2Q8TC59 973 aaKnown RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 TRAPPC12Q8WVT3 735 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 DCUN1D1Q96GG9 259 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 TMPRSS4Q9NRS4 437 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 FETUBQ9UGM5 382 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 GOLGA8TH3BQL2 631 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 H3BSA7 217 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 KLF11O14901 512 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 HCRTO43612 131 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 ZBED1O96006 694 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 KRT7P08729 469 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 FAM200BP0CF97 657 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 TBXAS1P24557 533 aaPredicted RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 PTPN7P35236 360 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 CHN2P52757 468 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 MCCD1P59942 119 aaPredicted RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 CELF3Q5SZQ8 465 aaKnown RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 DUS1LQ6P1R4 473 aaKnown RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 LILRA2Q8N149 483 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 ACVR1CQ8NER5 493 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 RXFP2Q8WXD0 754 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 ADPGKQ9BRR6 497 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 B3GNT5Q9BYG0 378 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 NIF3L1Q9GZT8 377 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 SEMA6AQ9H2E6 1030 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 VCX3BQ9H321 246 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 VCX3AQ9NNX9 186 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 ATXN10Q9UBB4 475 aa12.5□□□□□ -0.41
SEC24A-201ENST00000322887 APOBEC2Q9Y235 224 aaKnown RBP12.5□□□□□ -0.41
SEC24A-201ENST00000322887 USP12O75317 370 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 ERVK-10P10266 1014 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 TXNP10599 105 aaKnown RBP12.49□□□□□ -0.41
SEC24A-201ENST00000322887 AOC1P19801 751 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 ALDH1A3P47895 512 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 MYBPC1Q00872 1141 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 IRF9Q00978 393 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 LAMC2Q13753 1193 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 HNRNPDQ14103 355 aaKnown RBP12.49□□□□□ -0.41
SEC24A-201ENST00000322887 KRT81Q14533 505 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 CYTH1Q15438 398 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 NRF1Q16656 503 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 APLFQ8IW19 511 aaPredicted RBP12.49□□□□□ -0.41
SEC24A-201ENST00000322887 TP53INP2Q8IXH6 220 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 PCDH19Q8TAB3 1148 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 RIN3Q8TB24 985 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 SIGLEC10Q96LC7 697 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 DTNAQ9Y4J8 743 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 MRPL42Q9Y6G3 142 aaKnown RBP12.49□□□□□ -0.41
SEC24A-201ENST00000322887 DNAJA2O60884 412 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 FARP2O94887 1054 aaPredicted RBP12.49□□□□□ -0.41
SEC24A-201ENST00000322887 AKR1A1P14550 325 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 PDGFRAP16234 1089 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 XRCC1P18887 633 aaPredicted RBP12.49□□□□□ -0.41
SEC24A-201ENST00000322887 CYP3A5P20815 502 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 GRK4P32298 578 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 MLH1P40692 756 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 MS4A2Q01362 244 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 TMED1Q13445 227 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 ANKRD20A4Q4UJ75 823 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 OR6B2Q6IFH4 312 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 NIPA2Q8N8Q9 360 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 MCPH1Q8NEM0 835 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 CMASQ8NFW8 434 aaPredicted RBP12.49□□□□□ -0.41
SEC24A-201ENST00000322887 FAM110BQ8TC76 370 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 ATP6V0A1Q93050 837 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 LENG8Q96PV6 779 aaPredicted RBP12.49□□□□□ -0.41
SEC24A-201ENST00000322887 ELOVL4Q9GZR5 314 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 XYLT2Q9H1B5 865 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 PPCSQ9HAB8 311 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 C17orf75Q9HAS0 396 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 PDGFCQ9NRA1 345 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 FAM49BQ9NUQ9 324 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 THAP1Q9NVV9 213 aa12.49□□□□□ -0.41
SEC24A-201ENST00000322887 GNEQ9Y223 722 aaKnown RBP12.49□□□□□ -0.41
SEC24A-201ENST00000322887 COMMD3-BMI1R4GMX3 469 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms