RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PSMD12O00232 456 aaPredicted RBP17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 IFRD1O00458 451 aaPredicted RBP17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 ALOX5P09917 674 aa17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 FOXO4P98177 505 aa17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 VPS72Q15906 364 aa17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 CYP2R1Q6VVX0 501 aa17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 FAM136AQ96C01 138 aa17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 TEKT5Q96M29 485 aa17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 PRKD2Q9BZL6 878 aa17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 PLGRKTQ9HBL7 147 aa17.21■□□□□ 0.34
SMCHD1-201ENST00000320876 RNASEH1O60930 286 aaKnown RBP17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 CYP2F1P24903 491 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 ALDH9A1P49189 494 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 TMEM62Q0P6H9 643 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 TCEAL5Q5H9L2 206 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 DAGLBQ8NCG7 672 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 PHF21BQ96EK2 531 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 TMCO1Q9UM00 188 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 RRN3P2A6NIE6 340 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 H7C4K7 107 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 DCXO43602 365 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 YY1P25490 414 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 PIK3CGP48736 1102 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 CDH17Q12864 832 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 PRR5LQ6MZQ0 368 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 SPOCD1Q6ZMY3 1216 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 ARMCX6Q7L4S7 300 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 GATAD2AQ86YP4 633 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 GORASP1Q9BQQ3 440 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 TMEM138Q9NPI0 162 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 EURLQ9NYK6 297 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 C19orf81C9J6K1 198 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 LIN7AO14910 233 aaPredicted RBP17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 SLC26A3P40879 764 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 ELF3P78545 371 aaPredicted RBP17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 RHAGQ02094 409 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 MARK2Q7KZI7 788 aaKnown RBP17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 SPIRE2Q8WWL2 714 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 CDRT15Q96T59 188 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 KCNH7Q9NS40 1196 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 RGS14O43566 566 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 Q4G0T1 1027 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 NLNQ9BYT8 704 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 COQ6Q9Y2Z9 468 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 ERMARDQ5T6L9 678 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 AENQ8WTP8 325 aaKnown RBP17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 CDH9Q9ULB4 789 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 MRPS22P82650 360 aaKnown RBP17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 NFIAQ12857 509 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 HERC6Q8IVU3 1022 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 LRRC17Q8N6Y2 441 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 FICDQ9BVA6 458 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 RACGAP1Q9H0H5 632 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 ANAPC2Q9UJX6 822 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 HBP1O60381 514 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 PROCP04070 461 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 STRIP1Q5VSL9 837 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 RPRD1AQ96P16 312 aaPredicted RBP17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 TMEM216Q9P0N5 145 aa17.2■□□□□ 0.34
SMCHD1-201ENST00000320876 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 TRDMT1O14717 391 aaKnown RBP17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 PGM3O95394 542 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 CDC42P60953 191 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 FAM187BQ17R55 369 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 CLYBLQ8N0X4 340 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 OR52L1Q8NGH7 329 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 SPAG4Q9NPE6 437 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 OXCT1P55809 520 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 POU6F1Q14863 301 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 SLC45A4Q5BKX6 768 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 POMGNT2Q8NAT1 580 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 ARMCX1Q9P291 453 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 AMHR2Q16671 573 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 ATG14Q6ZNE5 492 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 FUKQ8N0W3 1084 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 PNPLA3Q9NST1 481 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 CMTM6Q9NX76 183 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 PHF11Q9UIL8 331 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 ZNF112Q9UJU3 913 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 ABCC3O15438 1527 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 CCNT2O60583 730 aaKnown RBP17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 TCF4P15884 667 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 RENBPP51606 427 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 MSLNQ13421 630 aaPredicted RBP17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 RUSC1Q9BVN2 902 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 QTRT2Q9H974 415 aaKnown RBP17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 HBS1LQ9Y450 684 aaKnown RBP17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 KBTBD13C9JR72 458 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 MGRN1O60291 552 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 EGFRP00533 1210 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 S100GP29377 79 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 TRIM32Q13049 653 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 NT5MQ9NPB1 228 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 MYH7BA7E2Y1 1941 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 SEC22BO75396 215 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 CAPGP40121 348 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 CYP24A1Q07973 514 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 PLA2G12BQ9BX93 195 aa17.19■□□□□ 0.34
SMCHD1-201ENST00000320876 VPS51Q9UID3 782 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms