RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ZYG11BQ9C0D3 744 aa14.03□□□□□ -0.16
PRPF18-201ENST00000320054 ZFP14Q9HCL3 533 aa14.03□□□□□ -0.16
PRPF18-201ENST00000320054 DONSONQ9NYP3 566 aa14.03□□□□□ -0.16
PRPF18-201ENST00000320054 EPS15L1Q9UBC2 864 aa14.03□□□□□ -0.16
PRPF18-201ENST00000320054 SHROOM3Q8TF72 1996 aa14.03□□□□□ -0.16
PRPF18-201ENST00000320054 NYNRINQ9P2P1 1898 aaKnown RBP14.02□□□□□ -0.16
PRPF18-201ENST00000320054 APOL1O14791 398 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 DCLK1O15075 740 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 CST8O60676 142 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 ERCC2P18074 760 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 TGM2P21980 687 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 AMPD1P23109 780 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 VIPR2P41587 438 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 ADCY2Q08462 1091 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 PAFAH1B3Q15102 231 aaKnown RBP14.02□□□□□ -0.17
PRPF18-201ENST00000320054 MPP7Q5T2T1 576 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 KAZNQ674X7 775 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 RWDD4Q6NW29 188 aaKnown RBP14.02□□□□□ -0.17
PRPF18-201ENST00000320054 RFWD3Q6PCD5 774 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 MTSS1LQ765P7 747 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 TTC13Q8NBP0 860 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 PPM1EQ8WY54 764 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 IGSF8Q969P0 613 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 ELSPBP1Q96BH3 223 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 RPRD1AQ96P16 312 aaPredicted RBP14.02□□□□□ -0.17
PRPF18-201ENST00000320054 TMEM248Q9NWD8 314 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 MIA3Q5JRA6 1907 aa14.02□□□□□ -0.17
PRPF18-201ENST00000320054 TCRBV7S2A1N4TA0A589 114 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 HEPACAM2A8MVW5 462 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 APOC4-APOC2K7ER74 178 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 PDE2AO00408 941 aaPredicted RBP14.01□□□□□ -0.17
PRPF18-201ENST00000320054 ECI2O75521 394 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 APOC2P02655 101 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 LLGL1Q15334 1064 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 SIX1Q15475 284 aaPredicted RBP14.01□□□□□ -0.17
PRPF18-201ENST00000320054 PUS10Q3MIT2 529 aaKnown RBP14.01□□□□□ -0.17
PRPF18-201ENST00000320054 MPPE1Q53F39 396 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 NCBP2-AS2Q69YL0 99 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 TANGO2Q6ICL3 276 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 CHST9Q7L1S5 443 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 NLRP14Q86W24 1093 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 MFSD6LQ8IWD5 586 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 LZTR1Q8N653 840 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 PLD5Q8N7P1 536 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 RTL3Q8N8U3 475 aaKnown RBP14.01□□□□□ -0.17
PRPF18-201ENST00000320054 TDRD5Q8NAT2 981 aaKnown RBP14.01□□□□□ -0.17
PRPF18-201ENST00000320054 HJURPQ8NCD3 748 aaPredicted RBP14.01□□□□□ -0.17
PRPF18-201ENST00000320054 TTC16Q8NEE8 873 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 DEPDC1BQ8WUY9 529 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 MYEOVQ96EZ4 313 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 PRICKLE1Q96MT3 831 aaPredicted RBP14.01□□□□□ -0.17
PRPF18-201ENST00000320054 LRRC3BQ96PB8 259 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 FRMD8P1Q9BZ68 369 aaPredicted RBP14.01□□□□□ -0.17
PRPF18-201ENST00000320054 HOMER3Q9NSC5 361 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 ETNK2Q9NVF9 386 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 THG1LQ9NWX6 298 aaKnown RBP14.01□□□□□ -0.17
PRPF18-201ENST00000320054 RAD54BQ9Y620 910 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 KIAA1549LQ6ZVL6 1849 aa14.01□□□□□ -0.17
PRPF18-201ENST00000320054 GOLGA6L10A0A0M3HER8 536 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 TYW5A2RUC4 315 aaKnown RBP14□□□□□ -0.17
PRPF18-201ENST00000320054 ANHXE9PGG2 379 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 KRIT1O00522 736 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 SCAMP3O14828 347 aaKnown RBP14□□□□□ -0.17
PRPF18-201ENST00000320054 CLDN11O75508 207 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 CNTN5O94779 1100 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 CYBBP04839 570 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 SERPINB6P35237 376 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 NR2C2P49116 596 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 MAPKAPK2P49137 400 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 CDH4P55283 916 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 FCHO2Q0JRZ9 810 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 PDGFRLQ15198 375 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 SMAD2Q15796 467 aaKnown RBP14□□□□□ -0.17
PRPF18-201ENST00000320054 RNF43Q68DV7 783 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 TMCO3Q6UWJ1 677 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 VITQ6UXI7 678 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 ZDHHC14Q8IZN3 488 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 CEP112Q8N8E3 955 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 MNS1Q8NEH6 495 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 OSCP1Q8WVF1 389 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 TMA16Q96EY4 203 aaKnown RBP14□□□□□ -0.17
PRPF18-201ENST00000320054 RPGRIP1Q96KN7 1286 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 PHF7Q9BWX1 381 aaPredicted RBP14□□□□□ -0.17
PRPF18-201ENST00000320054 KLC2Q9H0B6 622 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 SMARCAL1Q9NZC9 954 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 MPP6Q9NZW5 540 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 MARK1Q9P0L2 795 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 ZNF212Q9UDV6 495 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 FAM50BQ9Y247 325 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 NR2E1Q9Y466 385 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 TICRRQ7Z2Z1 1910 aa14□□□□□ -0.17
PRPF18-201ENST00000320054 MYO10Q9HD67 2058 aa13.99□□□□□ -0.17
PRPF18-201ENST00000320054 A0A1B0GVM2 712 aa13.99□□□□□ -0.17
PRPF18-201ENST00000320054 TCAF2A6NFQ2 919 aa13.99□□□□□ -0.17
PRPF18-201ENST00000320054 CCDC188H7C350 402 aa13.99□□□□□ -0.17
PRPF18-201ENST00000320054 TRDMT1O14717 391 aaKnown RBP13.99□□□□□ -0.17
PRPF18-201ENST00000320054 TSPAN3O60637 253 aa13.99□□□□□ -0.17
PRPF18-201ENST00000320054 IFNAR2P48551 515 aa13.99□□□□□ -0.17
PRPF18-201ENST00000320054 IRAK1P51617 712 aa13.99□□□□□ -0.17
PRPF18-201ENST00000320054 NDST2P52849 883 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms