RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 B3GNT5Q9BYG0 378 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 A0A1B0GVG6 124 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 SCNN1AP37088 669 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 SESN2P58004 480 aaPredicted RBP19.59■□□□□ 0.73
RTN4-201ENST00000317610 SNAPC2Q13487 334 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 NOL9Q5SY16 702 aaKnown RBP19.59■□□□□ 0.73
RTN4-201ENST00000317610 FBXL19Q6PCT2 694 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 SLC26A9Q7LBE3 791 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 NT5DC4Q86YG4 428 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 CPNE1Q99829 537 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 COG4Q9H9E3 785 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 C6orf203Q9P0P8 240 aaPredicted RBP19.59■□□□□ 0.73
RTN4-201ENST00000317610 MFHAS1Q9Y4C4 1052 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 NR2E3Q9Y5X4 410 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 PLXNA1Q9UIW2 1896 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 LOC100653049A0A140TA62 436 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 TMEM114B3SHH9 223 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 PDLIM1O00151 329 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 SOCS7O14512 581 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 DENRO43583 198 aaKnown RBP19.58■□□□□ 0.73
RTN4-201ENST00000317610 DCXO43602 365 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 KRT34O76011 436 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 PEX6Q13608 980 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 LAMB3Q13751 1172 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 MARVELD2Q8N4S9 558 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 ICA1LQ8NDH6 482 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 NDNQ99608 321 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 RNPEPQ9H4A4 650 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 PRDM16Q9HAZ2 1276 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 SNX15Q9NRS6 342 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 SYBUQ9NX95 663 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 GGA3Q9NZ52 723 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 PSMD13Q9UNM6 376 aa19.58■□□□□ 0.73
RTN4-201ENST00000317610 C22orf31O95567 290 aa19.58■□□□□ 0.72
RTN4-201ENST00000317610 GLDCP23378 1020 aa19.58■□□□□ 0.72
RTN4-201ENST00000317610 FOLH1Q04609 750 aa19.58■□□□□ 0.72
RTN4-201ENST00000317610 SPANXN3Q5MJ09 141 aa19.58■□□□□ 0.72
RTN4-201ENST00000317610 ACOT1Q86TX2 421 aa19.58■□□□□ 0.72
RTN4-201ENST00000317610 CCDC185Q8N715 623 aa19.58■□□□□ 0.72
RTN4-201ENST00000317610 CERS2Q96G23 380 aa19.58■□□□□ 0.72
RTN4-201ENST00000317610 EPAS1Q99814 870 aa19.58■□□□□ 0.72
RTN4-201ENST00000317610 RCOR3Q9P2K3 495 aaPredicted RBP19.58■□□□□ 0.72
RTN4-201ENST00000317610 PRPF19Q9UMS4 504 aaKnown RBP19.58■□□□□ 0.72
RTN4-201ENST00000317610 NME7Q9Y5B8 376 aa19.58■□□□□ 0.72
RTN4-201ENST00000317610 MYO18AQ92614 2054 aaKnown RBP19.57■□□□□ 0.72
RTN4-201ENST00000317610 CITO14578 2027 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 SMIM18P0DKX4 95 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 GMPSP49915 693 aaPredicted RBP19.57■□□□□ 0.72
RTN4-201ENST00000317610 PRAMEF18Q5VWM3 479 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 ARHGAP22Q7Z5H3 698 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 PQLC1Q8N2U9 271 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 ZNF781Q8N8C0 355 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 HIPK4Q8NE63 616 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 CPB2Q96IY4 423 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 LGMNQ99538 433 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 MRPL45Q9BRJ2 306 aaKnown RBP19.57■□□□□ 0.72
RTN4-201ENST00000317610 SMARCAD1Q9H4L7 1026 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 ZNF358Q9NW07 568 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 INPP5FQ9Y2H2 1132 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 DTNAQ9Y4J8 743 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 ATP9BO43861 1147 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 ZMPSTE24O75844 475 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 GOT1P17174 413 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 ALDH1A3P47895 512 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 SERPINB8P50452 374 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 CLCN2P51788 898 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 SLC9B1Q4ZJI4 515 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 ARHGAP17Q68EM7 881 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 TMC7Q7Z402 723 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 EGFL6Q8IUX8 553 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 OXCT2Q9BYC2 517 aaPredicted RBP19.57■□□□□ 0.72
RTN4-201ENST00000317610 FAM49BQ9NUQ9 324 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 TXNDC16Q9P2K2 825 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 STK39Q9UEW8 545 aa19.57■□□□□ 0.72
RTN4-201ENST00000317610 C15orf38-AP3S2A0A0A6YYH1 394 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 F5H423 210 aaPredicted RBP19.56■□□□□ 0.72
RTN4-201ENST00000317610 G3V2L1 256 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 RNF103O00237 685 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 STK10O94804 968 aaKnown RBP19.56■□□□□ 0.72
RTN4-201ENST00000317610 FBXO21O94952 628 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 POLBP06746 335 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 ERVK-10P10266 1014 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 ARF4P18085 180 aaPredicted RBP19.56■□□□□ 0.72
RTN4-201ENST00000317610 RPL34P49207 117 aaKnown RBP19.56■□□□□ 0.72
RTN4-201ENST00000317610 GLUD2P49448 558 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 USP4Q13107 963 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 NAPRTQ6XQN6 538 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 ARPINQ7Z6K5 226 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 TMEM126BQ8IUX1 230 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 DCLK2Q8N568 766 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 EFCAB3Q8N7B9 438 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 CNDP1Q96KN2 507 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 SPATA33Q96N06 139 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 RBBP8Q99708 897 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 PIH1D1Q9NWS0 290 aaKnown RBP19.56■□□□□ 0.72
RTN4-201ENST00000317610 MFSD11O43934 449 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 GMPRP36959 345 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 FRG1Q14331 258 aaKnown RBP19.56■□□□□ 0.72
RTN4-201ENST00000317610 SOWAHAQ2M3V2 549 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 GRAMD1BQ3KR37 738 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms