RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 RNASEH1O60930 286 aaKnown RBP18.37■□□□□ 0.53
TPM1-203ENST00000317516 C7P10643 843 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 EEF1GP26641 437 aaKnown RBP18.37■□□□□ 0.53
TPM1-203ENST00000317516 MAOBP27338 520 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 PMLP29590 882 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 CSKP41240 450 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 OXCT1P55809 520 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 SLC12A1Q13621 1099 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 RAPGEF1Q13905 1077 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 TTC31Q49AM3 519 aaPredicted RBP18.37■□□□□ 0.53
TPM1-203ENST00000317516 HSP90AA4PQ58FG1 418 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 MIIPQ5JXC2 388 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 TTC39BQ5VTQ0 682 aaPredicted RBP18.37■□□□□ 0.53
TPM1-203ENST00000317516 DCAF12L1Q5VU92 463 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 SLC47A2Q86VL8 602 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 CACUL1Q86Y37 369 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 ZNF366Q8N895 744 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 TMEM35BQ8NCS4 154 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 C1orf131Q8NDD1 294 aaKnown RBP18.37■□□□□ 0.53
TPM1-203ENST00000317516 LMLNQ96KR4 655 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 MIR1-1HGQ9H1L0 117 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 TMEM51Q9NW97 253 aa18.37■□□□□ 0.53
TPM1-203ENST00000317516 XPO7Q9UIA9 1087 aaKnown RBP18.37■□□□□ 0.53
TPM1-203ENST00000317516 UPK3BL1B0FP48 263 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 UPK3BL2E5RIL1 263 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 TPM2P07951 284 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 SRPRAP08240 638 aaKnown RBP18.36■□□□□ 0.53
TPM1-203ENST00000317516 TPRP12270 2363 aaKnown RBP18.36■□□□□ 0.53
TPM1-203ENST00000317516 NNMTP40261 264 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 SHC2P98077 582 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 SLC6A3Q01959 620 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 EIF4EBP2Q13542 120 aaPredicted RBP18.36■□□□□ 0.53
TPM1-203ENST00000317516 DRAP1Q14919 205 aaPredicted RBP18.36■□□□□ 0.53
TPM1-203ENST00000317516 TCP11X2Q5H9J9 407 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 PITRM1Q5JRX3 1037 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 RABGAP1LQ5R372 815 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 KLHDC7AQ5VTJ3 777 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 RNF219Q5W0B1 726 aaPredicted RBP18.36■□□□□ 0.53
TPM1-203ENST00000317516 ZNF776Q68DI1 518 aaPredicted RBP18.36■□□□□ 0.53
TPM1-203ENST00000317516 FAM124AQ86V42 546 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 MINDY1Q8N5J2 469 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 MYEOVQ96EZ4 313 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 BTBD1Q9H0C5 482 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 SAMSN1Q9NSI8 373 aaKnown RBP18.36■□□□□ 0.53
TPM1-203ENST00000317516 LMBRD1Q9NUN5 540 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 RRN3Q9NYV6 651 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 SCML1Q9UN30 329 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 NCKAP1Q9Y2A7 1128 aa18.36■□□□□ 0.53
TPM1-203ENST00000317516 NUP205Q92621 2012 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 SYNJ2BP-COX16A0A087WUM0 186 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 GIPC1O14908 333 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 GRAP2O75791 330 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 NOS2P35228 1153 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 RPS14P62263 151 aaKnown RBP18.35■□□□□ 0.53
TPM1-203ENST00000317516 PITX1P78337 314 aaPredicted RBP18.35■□□□□ 0.53
TPM1-203ENST00000317516 ECT2LQ008S8 904 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 ZNF252P-AS1Q0IIN9 211 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 SEMA3BQ13214 749 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 SLC14A1Q13336 389 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 HNRNPDQ14103 355 aaKnown RBP18.35■□□□□ 0.53
TPM1-203ENST00000317516 HNRNPA1L2Q32P51 320 aaKnown RBP18.35■□□□□ 0.53
TPM1-203ENST00000317516 FSCBQ5H9T9 825 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 OLFML1Q6UWY5 402 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 FAM183BPQ6ZVS7 135 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 SLC26A9Q7LBE3 791 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 DEFB124Q8NES8 71 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 ZNF397Q8NF99 534 aaPredicted RBP18.35■□□□□ 0.53
TPM1-203ENST00000317516 ENOX1Q8TC92 643 aaKnown RBP18.35■□□□□ 0.53
TPM1-203ENST00000317516 FSCN3Q9NQT6 498 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 DNAAF2Q9NVR5 837 aaKnown RBP18.35■□□□□ 0.53
TPM1-203ENST00000317516 COX16Q9P0S2 106 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 AJAP1Q9UKB5 411 aaPredicted RBP18.35■□□□□ 0.53
TPM1-203ENST00000317516 INTS6Q9UL03 887 aaKnown RBP18.35■□□□□ 0.53
TPM1-203ENST00000317516 ERVW-1Q9UQF0 538 aa18.35■□□□□ 0.53
TPM1-203ENST00000317516 PLXND1Q9Y4D7 1925 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 TARSL2A2RTX5 802 aaKnown RBP18.34■□□□□ 0.53
TPM1-203ENST00000317516 BCAT2O15382 392 aaPredicted RBP18.34■□□□□ 0.53
TPM1-203ENST00000317516 ERBB2P04626 1255 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 UCHL3P15374 230 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 CYP11B1P15538 503 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 RDXP35241 583 aaKnown RBP18.34■□□□□ 0.53
TPM1-203ENST00000317516 SULT2A1Q06520 285 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 KCNMA1Q12791 1236 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 NME3Q13232 169 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 ARID5BQ14865 1188 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 LRSAM1Q6UWE0 723 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 MMS22LQ6ZRQ5 1243 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 MSANTD4Q8NCY6 345 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 GANCQ8TET4 914 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 STK33Q9BYT3 514 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 RSPH9Q9H1X1 276 aaPredicted RBP18.34■□□□□ 0.53
TPM1-203ENST00000317516 SGK2Q9HBY8 427 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 STAP1Q9ULZ2 295 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
TPM1-203ENST00000317516 A0A1B0GVM2 712 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 TCAF2A6NFQ2 919 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 GOLGA6L22H0YM25 854 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 M0QYT0 321 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 DAB1O75553 588 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms