RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TBX20Q9UMR3 447 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 NFU1Q9UMS0 254 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 SLC12A4Q9UP95 1085 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 UBE2J1Q9Y385 318 aaPredicted RBP4.46□□□□□ -1.7
SMCO3-201ENST00000316048 ATP7BP35670 1465 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 SLIT1O75093 1534 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 SETD1AO15047 1707 aaKnown RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 CENPVL1A0A0U1RR11 272 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 DBX1A6NMT0 343 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 A8MVJ9 347 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 KAT7O95251 611 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 MBPP02686 304 aaPredicted RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 CD19P15391 556 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 CREB1P16220 341 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 FPR3P25089 353 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 BMPR1AP36894 532 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 CDK7P50613 346 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 RRP1P56182 461 aaKnown RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 PSG6Q00889 435 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 NFIXQ14938 502 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 ST3GAL2Q16842 350 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 DSTYKQ6XUX3 929 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 H1FNTQ75WM6 255 aaPredicted RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 TDRD7Q8NHU6 1098 aaKnown RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 FUBP1Q96AE4 644 aaKnown RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 ARRDC3Q96B67 414 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 PKNOX2Q96KN3 472 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 STN1Q9H668 368 aaKnown RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 ORC3Q9UBD5 711 aaPredicted RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 BAG5Q9UL15 447 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 SLC45A1Q9Y2W3 748 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 PPIP5K1Q6PFW1 1433 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 ADAMTS13Q76LX8 1427 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 KNDC1Q76NI1 1749 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 PSMD9O00233 223 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 YY2O15391 372 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 NKX2-8O15522 239 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 USO1O60763 962 aaKnown RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 CHN1P15882 459 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 SELENOPP49908 381 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 RCAN1P53805 252 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 PDE1AP54750 535 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 RBM6P78332 1123 aaKnown RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 KCTD2Q14681 263 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 PRKD1Q15139 912 aaPredicted RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 TXNRD1Q16881 649 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 HS1BP3Q53T59 392 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 WDR45BQ5MNZ6 344 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 C1orf210Q8IVY1 113 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 TSPYL6Q8N831 410 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 FSIP1Q8NA03 581 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 ADAMTS18Q8TE60 1221 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 SLC25A43Q8WUT9 341 aaPredicted RBP4.45□□□□□ -1.7
SMCO3-201ENST00000316048 RFFLQ8WZ73 363 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 MYEOVQ96EZ4 313 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 COG3Q96JB2 828 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 ELOVL1Q9BW60 279 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 PRDM13Q9H4Q3 707 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 PLEKHA5Q9HAU0 1116 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D22BQ9NU19 505 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 ZDHHC7Q9NXF8 308 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 NAALADL1Q9UQQ1 740 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 TCAF1Q9Y4C2 921 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 CYP46A1Q9Y6A2 500 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 ITIH6Q6UXX5 1313 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 ZNF521Q96K83 1311 aa4.45□□□□□ -1.7
SMCO3-201ENST00000316048 CD163L1Q9NR16 1453 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 ARHGAP23Q9P227 1491 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 CPS1P31327 1500 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3DA0A087WVF3 549 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3IA0A087WXS9 549 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3EA0A087X179 549 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3KA0A087X1G2 549 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 WDR27A2RRH5 827 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3BA6NDS4 549 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3FA6NER0 549 aaPredicted RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 PGPEP1LA6NFU8 196 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TMEM200CA6NKL6 621 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3LB9A6J9 549 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 GRM8O00222 908 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 CES2O00748 559 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 PROM1O43490 865 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 PDE8BO95263 885 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 C1SP09871 688 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3HP0C7X1 549 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 NR2F6P10588 404 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 LAG3P18627 525 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 GRK5P34947 590 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 PGM1P36871 562 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 IGHMBP2P38935 993 aaKnown RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 DIO1P49895 249 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 CCR9P51686 369 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 GUCY1B3Q02153 619 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 GPR68Q15743 365 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 FAM187BQ17R55 369 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 USP39Q53GS9 565 aaKnown RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3GQ6DHY5 549 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3CQ6IPX1 549 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms