RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 MTG2Q9H4K7 406 aa15.1■□□□□ 0.01
PPP1CA-201ENST00000312989 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
PPP1CA-201ENST00000312989 TMPRSS4Q9NRS4 437 aa15.1■□□□□ 0.01
PPP1CA-201ENST00000312989 CYP8B1Q9UNU6 501 aa15.1■□□□□ 0.01
PPP1CA-201ENST00000312989 CEP83Q9Y592 693 aa15.1■□□□□ 0.01
PPP1CA-201ENST00000312989 ABCA7Q8IZY2 2146 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 TNRC6BQ9UPQ9 1833 aaKnown RBP15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 SYNJ2BP-COX16A0A087WUM0 186 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 TCRBV5S1A1TA0A578 114 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 LNP1A1A4G5 178 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 C10orf142B7Z368 130 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 M0QYT0 321 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 PAGE1O75459 146 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 CAVIN2O95810 425 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 EPHX1P07099 455 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 CSKP41240 450 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 LIMK1P53667 647 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 GSCP56915 257 aaPredicted RBP15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 UBXN1Q04323 297 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 AUHQ13825 339 aaKnown RBP15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 KLHL40Q2TBA0 621 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 PITRM1Q5JRX3 1037 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 FAM102AQ5T9C2 384 aaPredicted RBP15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 E4F1Q66K89 784 aaPredicted RBP15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 SERPINA13PQ6UXR4 307 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 ARMCX6Q7L4S7 300 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 LPCAT2Q7L5N7 544 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 ERMP1Q7Z2K6 904 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 ERICH1Q86X53 443 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 TMPRSS6Q8IU80 811 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 APCDD1Q8J025 514 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 CCAR2Q8N163 923 aaKnown RBP15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 CARNMT1Q8N4J0 409 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 ATP6V0D2Q8N8Y2 350 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 UCMAQ8WVF2 138 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 SPACA7Q96KW9 195 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 PRSS16Q9NQE7 514 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 ITM2CQ9NQX7 267 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 WSB2Q9NYS7 404 aaPredicted RBP15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 COX16Q9P0S2 106 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 ZNF212Q9UDV6 495 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 OR51B4Q9Y5P0 310 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 SNX10Q9Y5X0 201 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 CKAP5Q14008 2032 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 SDK1Q7Z5N4 2213 aa15.09■□□□□ 0.01
PPP1CA-201ENST00000312989 MED19A0JLT2 244 aaPredicted RBP15.08■□□□□ 0
PPP1CA-201ENST00000312989 ZNF217O75362 1048 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 ENDOD1O94919 500 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 ITPKAP23677 461 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 STAT1P42224 750 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 DHPSP49366 369 aaPredicted RBP15.08■□□□□ 0
PPP1CA-201ENST00000312989 NME3Q13232 169 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 STARD3Q14849 445 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 ARID5BQ14865 1188 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 PLEKHG6Q3KR16 790 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 SLC25A52Q3SY17 297 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 EMC1Q8N766 993 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 NEK11Q8NG66 645 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 OR2T3Q8NH03 318 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 JOSD2Q8TAC2 188 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 SLC30A5Q8TAD4 765 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 NAP1L5Q96NT1 182 aaPredicted RBP15.08■□□□□ 0
PPP1CA-201ENST00000312989 TTYH3Q9C0H2 523 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 SYNCQ9H7C4 482 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 PRDM16Q9HAZ2 1276 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 RRN3Q9NYV6 651 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 PILRBQ9UKJ0 227 aa15.08■□□□□ 0
PPP1CA-201ENST00000312989 SPAG17Q6Q759 2223 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 ITIH6Q6UXX5 1313 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 ATXN2Q99700 1313 aaKnown RBP15.07■□□□□ 0
PPP1CA-201ENST00000312989 A0A1B0GTH6 734 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 A0A1B0GVM2 712 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 TCAF2A6NFQ2 919 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 F5H5T6 163 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 CDX4O14627 284 aaPredicted RBP15.07■□□□□ 0
PPP1CA-201ENST00000312989 FOXD2O60548 495 aaPredicted RBP15.07■□□□□ 0
PPP1CA-201ENST00000312989 GJB6O95452 261 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 SLC2A3P11169 496 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 MZF1P28698 734 aaPredicted RBP15.07■□□□□ 0
PPP1CA-201ENST00000312989 SULT1E1P49888 294 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 ZNF165P49910 485 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 TPMTP51580 245 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 PLK1P53350 603 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 SNX16P57768 344 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 RNASE9P60153 205 aaKnown RBP15.07■□□□□ 0
PPP1CA-201ENST00000312989 CDH18Q13634 790 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 CLEC16AQ2KHT3 1053 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 KIAA1324Q6UXG2 1013 aaKnown RBP15.07■□□□□ 0
PPP1CA-201ENST00000312989 CYP2U1Q7Z449 544 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 DEFB119Q8N690 84 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 ZNF557Q8N988 423 aaPredicted RBP15.07■□□□□ 0
PPP1CA-201ENST00000312989 KDM1BQ8NB78 822 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 ZNF419Q96HQ0 510 aaPredicted RBP15.07■□□□□ 0
PPP1CA-201ENST00000312989 CFAP57Q96MR6 1250 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 SPAG5Q96R06 1193 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 C11orf70Q9BRQ4 267 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 RTKNQ9BST9 563 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 TKTL2Q9H0I9 626 aa15.07■□□□□ 0
PPP1CA-201ENST00000312989 PDCL3Q9H2J4 239 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms