RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 NME8Q8N427 588 aa13.81□□□□□ -0.2
CCDC13-201ENST00000310232 ABTB1Q969K4 478 aaPredicted RBP13.81□□□□□ -0.2
CCDC13-201ENST00000310232 FCRL3Q96P31 734 aaPredicted RBP13.81□□□□□ -0.2
CCDC13-201ENST00000310232 CDT1Q9H211 546 aa13.81□□□□□ -0.2
CCDC13-201ENST00000310232 ATXN10Q9UBB4 475 aa13.81□□□□□ -0.2
CCDC13-201ENST00000310232 DNAJB4Q9UDY4 337 aa13.81□□□□□ -0.2
CCDC13-201ENST00000310232 NME7Q9Y5B8 376 aa13.81□□□□□ -0.2
CCDC13-201ENST00000310232 PARP14Q460N5 1801 aa13.81□□□□□ -0.2
CCDC13-201ENST00000310232 RLFQ13129 1914 aa13.81□□□□□ -0.2
CCDC13-201ENST00000310232 FARP2O94887 1054 aaPredicted RBP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 PTPN1P18031 435 aaKnown RBP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 MTTPP55157 894 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 PITX1P78337 314 aaPredicted RBP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 CXCL9Q07325 125 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 TARBP2Q15633 366 aaKnown RBP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 FAM47CQ5HY64 1035 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 ARCQ7LC44 396 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 TTC30AQ86WT1 665 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 PQLC1Q8N2U9 271 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 ARHGAP18Q8N392 663 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 CEP70Q8NHQ1 597 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 RCN3Q96D15 328 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 CATSPER2Q96P56 530 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 BCO2Q9BYV7 579 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 NUF2Q9BZD4 464 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 TMEM134Q9H6X4 195 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 ITGA11Q9UKX5 1188 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 PHF24Q9UPV7 400 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 FIS1Q9Y3D6 152 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 TMEM233B4DJY2 109 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 KCNK1O00180 336 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 NOP56O00567 594 aaKnown RBP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 KLHL2O95198 593 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 ARIH2O95376 493 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 HSPA4LO95757 839 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 APBA3O96018 575 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 PSMB4P28070 264 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 GALK1P51570 392 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 RABGGTBP53611 331 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 ZPBP2Q6X784 338 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 DCLK2Q8N568 766 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 C7orf31Q8N865 590 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 COPS5Q92905 334 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 PKP2Q99959 881 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 DTLQ9NZJ0 730 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 TK2O00142 265 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 MAFGO15525 162 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 FOXD2O60548 495 aaPredicted RBP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 SRGAP2BP0DMP2 458 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 NIPAL4Q0D2K0 466 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 HEATR6Q6AI08 1181 aaKnown RBP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 SLC9A4Q6AI14 798 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 IL31Q6EBC2 164 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 ADGRG6Q86SQ4 1221 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 FAM131BQ86XD5 332 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 CPNE9Q8IYJ1 553 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 PNPLA1Q8N8W4 532 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 COLGALT1Q8NBJ5 622 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 BHLHE22Q8NFJ8 381 aaPredicted RBP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 FAM110BQ8TC76 370 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 KLHL32Q96NJ5 620 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 SNX15Q9NRS6 342 aa13.8□□□□□ -0.2
CCDC13-201ENST00000310232 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
CCDC13-201ENST00000310232 BCLAF3A2AJT9 711 aaKnown RBP13.79□□□□□ -0.2
CCDC13-201ENST00000310232 GLRA3O75311 464 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 CPA3P15088 417 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 HDCP19113 662 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 SDC4P31431 198 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 AVPR1AP37288 418 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 CEACAM7Q14002 265 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 TBCCQ15814 346 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 OGFRL1Q5TC84 451 aaPredicted RBP13.79□□□□□ -0.2
CCDC13-201ENST00000310232 NXNQ6DKJ4 435 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 MPZL3Q6UWV2 235 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
CCDC13-201ENST00000310232 FAM83AQ86UY5 434 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 TMA16Q96EY4 203 aaKnown RBP13.79□□□□□ -0.2
CCDC13-201ENST00000310232 KCTD15Q96SI1 283 aaPredicted RBP13.79□□□□□ -0.2
CCDC13-201ENST00000310232 RPF1Q9H9Y2 349 aaKnown RBP13.79□□□□□ -0.2
CCDC13-201ENST00000310232 RPS6KL1Q9Y6S9 549 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 ZBTB42B2RXF5 422 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 MAFO75444 373 aaPredicted RBP13.79□□□□□ -0.2
CCDC13-201ENST00000310232 FAM200BP0CF97 657 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 LCP1P13796 627 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 BACE1P56817 501 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 FLOT2Q14254 428 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 STXBP2Q15833 593 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 WDR78Q5VTH9 848 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 KRT27Q7Z3Y8 459 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 NCAPG2Q86XI2 1143 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 MAP7D3Q8IWC1 876 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 RTP4Q96DX8 246 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 CMTM5Q96DZ9 223 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 HPDLQ96IR7 371 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 NPAS2Q99743 824 aa13.79□□□□□ -0.2
CCDC13-201ENST00000310232 MRPL1Q9BYD6 325 aaKnown RBP13.79□□□□□ -0.2
CCDC13-201ENST00000310232 DPEP3Q9H4B8 488 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms