RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 FNTAP49354 379 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 CARSP49589 748 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 GTF2A1P52655 376 aaPredicted RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 NAP1L1P55209 391 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 EIF3BP55884 814 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 NLRP11P59045 1033 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 POLR2FP61218 127 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 GUCY2DQ02846 1103 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 GFPT1Q06210 699 aaPredicted RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 PPP2R5DQ14738 602 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 TCEAL1Q15170 157 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 UGCGQ16739 394 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 BMT2Q1RMZ1 405 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ZNF484Q5JVG2 852 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 RARS2Q5T160 578 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 SWSAP1Q6NVH7 229 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 DPY19L2P1Q6NXN4 242 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 EPM2AIP1Q7L775 607 aaPredicted RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ERMP1Q7Z2K6 904 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 TRMT1LQ7Z2T5 733 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 MAATS1Q7Z4T9 603 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 IRF2BP2Q7Z5L9 587 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 GSPT2Q8IYD1 628 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 LRRC71Q8N4P6 559 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 OTUD6BQ8N6M0 293 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 LRRC57Q8N9N7 239 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 CCDC26Q8TAB7 109 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ERMNQ8TAM6 284 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 CASKIN2Q8WXE0 1202 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 HAS1Q92839 578 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 LPPQ93052 612 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 LENG9Q96B70 501 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ARL8AQ96BM9 186 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ZBTB8AQ96BR9 441 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 CENPTQ96BT3 561 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 CCDC43Q96MW1 224 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ZNF558Q96NG5 402 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 FERD3LQ96RJ6 166 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 NAP1L3Q99457 506 aaPredicted RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 LSM14BQ9BX40 385 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 FAM129AQ9BZQ8 928 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ZBP1Q9H171 429 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 AZI2Q9H6S1 392 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ELAC1Q9H777 363 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 TMBIM4Q9HC24 238 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 EPB41L5Q9HCM4 733 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 KCNMB3Q9NPA1 279 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 NGRNQ9NPE2 291 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ENTPD7Q9NQZ7 604 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 C1orf112Q9NSG2 853 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 SPG21Q9NZD8 308 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 DDX25Q9UHL0 483 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 ING1Q9UK53 422 aaPredicted RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 NFU1Q9UMS0 254 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 PCDHA12Q9UN75 941 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 DMXL2Q8TDJ6 3036 aa5.17□□□□□ -1.58
CKS1B-201ENST00000308987 DSPP15924 2871 aaKnown RBP5.17□□□□□ -1.58
CKS1B-201ENST00000308987 AKAP13Q12802 2813 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 ZFYVE26Q68DK2 2539 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 A0A087X0T9 212 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 A0A0U1RQF3 1178 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 TMEM150BA6NC51 233 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 C5orf60A6NFR6 353 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 TNFRSF10CO14798 259 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 RAD51CO43502 376 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 NARSO43776 548 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 SLC37A4O43826 429 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CALUO43852 315 aaPredicted RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 MARCH6O60337 910 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 GREM1O60565 184 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 TDP2O95551 362 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CXCL14O95715 111 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 FOSP01100 380 aaPredicted RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 AFPP02771 609 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 RPLP2P05387 115 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CYP3A4P08684 503 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 H2AFZP0C0S5 128 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CCDC172P0C7W6 258 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 PLA2G4BP0C869 781 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 FAM228BP0C875 321 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 MYZAPP0CAP1 466 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 ITGA4P13612 1032 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 GAP43P17677 238 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CYP11B2P19099 503 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 RPL13P26373 211 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 MATR3P43243 847 aaKnown RBP eCLIP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 SLC26A2P50443 739 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 GPC3P51654 580 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 DRG2P55039 364 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 HADHBP55084 474 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 BCAR1P56945 870 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 SETQ01105 290 aaPredicted RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 SLC7A5Q01650 507 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 ADAM9Q13443 819 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 RAPGEF1Q13905 1077 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 KNOP1Q1ED39 458 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 Q4G0T1 1027 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 NAA35Q5VZE5 725 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 KIAA1841Q6NSI8 718 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 EFCAB12Q6NXP0 572 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms