RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 AMPD3Q01432 767 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 NCEH1Q6PIU2 408 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 LAYNQ6UX15 382 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 UBR7Q8N806 425 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 CCDC97Q96F63 343 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-201ENST00000302278 CLIC6Q96NY7 704 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 NEUROG2Q9H2A3 272 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 APOBEC3GQ9HC16 384 aaKnown RBP6.73□□□□□ -1.33
ITGB1-201ENST00000302278 PLA2G4CQ9UP65 541 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 NUMA1Q14980 2115 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 CBX4O00257 560 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 KCNK3O14649 394 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 XPO1O14980 1071 aaKnown RBP6.73□□□□□ -1.33
ITGB1-201ENST00000302278 OPA1O60313 960 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 IDEP14735 1019 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 ABCB4P21439 1286 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 EIF4EBP2Q13542 120 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-201ENST00000302278 PPP1R26Q5T8A7 1209 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-201ENST00000302278 NEK5Q6P3R8 708 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 ZSCAN30Q86W11 494 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 GATAD2AQ86YP4 633 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 WFDC5Q8TCV5 224 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 SNX19Q92543 992 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 PREBQ9HCU5 417 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 ABCB8Q9NUT2 735 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 INTS6Q9UL03 887 aaKnown RBP6.73□□□□□ -1.33
ITGB1-201ENST00000302278 TRAF3IP3Q9Y228 551 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 PTPRQQ9UMZ3 2332 aa6.73□□□□□ -1.33
ITGB1-201ENST00000302278 PDXKO00764 312 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 KLRC4O43908 158 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SIN3BO75182 1162 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SGSHP51688 502 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SEMG2Q02383 582 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SLC12A1Q13621 1099 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 ARL13BQ3SXY8 428 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SMYD5Q6GMV2 418 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SV2AQ7L0J3 742 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 FAM124AQ86V42 546 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SLC25A45Q8N413 288 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 ANKRD52Q8NB46 1076 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 DDI1Q8WTU0 396 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CYB5D2Q8WUJ1 264 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CCDC127Q96BQ5 260 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 PRICKLE1Q96MT3 831 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CIPCQ9C0C6 399 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 B3GNT4Q9C0J1 378 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 NIF3L1Q9GZT8 377 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 KLHL11Q9NVR0 708 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 FBXL12Q9NXK8 326 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 NCKIPSDQ9NZQ3 722 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CSNK1G3Q9Y6M4 447 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 URB1O60287 2271 aaKnown RBP6.72□□□□□ -1.33
ITGB1-201ENST00000302278 A0A1W2PNU3 283 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CD70P32970 193 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 DLG4P78352 724 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CCDC173Q0VFZ6 552 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 EFEMP1Q12805 493 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 LINC00303Q3SY05 128 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 ADAT2Q7Z6V5 191 aaKnown RBP6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SLC4A11Q8NBS3 891 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 FRS2Q8WU20 508 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 KCNE4Q8WWG9 221 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 HPS3Q969F9 1004 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 FAM49BQ9NUQ9 324 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 ERVW-1Q9UQF0 538 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 ACACAQ13085 2346 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 COL6A6A6NMZ7 2263 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 ARID1BQ8NFD5 2236 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-201ENST00000302278 TRIM38O00635 465 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 RNASEH1O60930 286 aaKnown RBP6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CD2BP2O95400 341 aaKnown RBP6.72□□□□□ -1.33
ITGB1-201ENST00000302278 ZBED1O96006 694 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 POLR2EP19388 210 aaKnown RBP6.72□□□□□ -1.33
ITGB1-201ENST00000302278 ADORA2BP29275 332 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CASP4P49662 377 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CYP2J2P51589 502 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 CLDN6P56747 220 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 C8orf34Q49A92 452 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 PTPRN2Q92932 1015 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SLC39A13Q96H72 371 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 ABCC13Q9NSE7 274 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 IL17BQ9UHF5 180 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 PCDHB1Q9Y5F3 818 aa6.72□□□□□ -1.33
ITGB1-201ENST00000302278 SLC12A8A0AV02 714 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 PRAMEF26H0Y7S4 382 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 MID1O15344 667 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 SIGLEC6O43699 453 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 TCEA3O75764 348 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 HLA-DRAP01903 254 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 MZF1P28698 734 aaPredicted RBP6.71□□□□□ -1.33
ITGB1-201ENST00000302278 SLC6A4P31645 630 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 RAD23BP54727 409 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 BNIP3Q12983 259 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 SERINC3Q13530 473 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 NADSYN1Q6IA69 706 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 DCP2Q8IU60 420 aaKnown RBP6.71□□□□□ -1.33
ITGB1-201ENST00000302278 HJURPQ8NCD3 748 aaPredicted RBP6.71□□□□□ -1.33
ITGB1-201ENST00000302278 SLC46A1Q96NT5 459 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 LGMNQ99538 433 aa6.71□□□□□ -1.33
ITGB1-201ENST00000302278 CNGB3Q9NQW8 809 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms