RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SFTPA1Q8IWL2 248 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 SPATA17Q96L03 361 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 PARVAQ9NVD7 372 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 EHD2Q9NZN4 543 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 NME7Q9Y5B8 376 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 WDFY3Q8IZQ1 3526 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.87■■□□□ 1.09
SMCO4-201ENST00000298966 BUB1O43683 1085 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 ADH1CP00326 375 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 PDGFRBP09619 1106 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 PRLRP16471 622 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 LMO2P25791 158 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 GRIA2P42262 883 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 GABRB2P47870 512 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 FAM193AP78312 1265 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 SLC7A9P82251 487 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 RPL6Q02878 288 aaKnown RBP21.87■■□□□ 1.09
SMCO4-201ENST00000298966 BST2Q10589 180 aaKnown RBP21.87■■□□□ 1.09
SMCO4-201ENST00000298966 PTP4A2Q12974 167 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 PPP1R26Q5T8A7 1209 aaPredicted RBP21.87■■□□□ 1.09
SMCO4-201ENST00000298966 EMC10Q5UCC4 262 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 PLEKHA7Q6IQ23 1121 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 C19orf48Q6RUI8 117 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 VSTM1Q6UX27 236 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 SLFN11Q7Z7L1 901 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 ZDHHC17Q8IUH5 632 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 WDTC1Q8N5D0 677 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 MINDY1Q8N5J2 469 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 MYRIPQ8NFW9 859 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 ZNF564Q8TBZ8 553 aaPredicted RBP21.87■■□□□ 1.09
SMCO4-201ENST00000298966 ARHGEF26Q96DR7 871 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 CEP295NLQ96MC4 621 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 C11orf70Q9BRQ4 267 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 ACACAQ13085 2346 aa21.87■■□□□ 1.09
SMCO4-201ENST00000298966 GCN1Q92616 2671 aaKnown RBP21.87■■□□□ 1.09
SMCO4-201ENST00000298966 HCRTO43612 131 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 GRIK1P39086 918 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 TNFRSF4P43489 277 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 KIR2DL1P43626 348 aaPredicted RBP21.86■■□□□ 1.09
SMCO4-201ENST00000298966 ACADSBP45954 432 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 KDSRQ06136 332 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 PDCLQ13371 301 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 ORC1Q13415 861 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 FAM171BQ6P995 826 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 MMS22LQ6ZRQ5 1243 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 DENND5BQ6ZUT9 1274 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 C3orf20Q8ND61 904 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 MYCBPAPQ8TBZ2 947 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 C18orf8Q96DM3 657 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 HSFY1Q96LI6 401 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 NUP85Q9BW27 656 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 DPEP3Q9H4B8 488 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 SYNCQ9H7C4 482 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 CAPN10Q9HC96 672 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 ZDHHC4Q9NPG8 344 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 GPSM3Q9Y4H4 160 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 MRFAP1Q9Y605 127 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 CPQQ9Y646 472 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 IGSF10Q6WRI0 2623 aa21.86■■□□□ 1.09
SMCO4-201ENST00000298966 PCDH15Q96QU1 1955 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 A0A0A0MRY4 1105 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 GRID2IPA4D2P6 1211 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 ADAM23O75077 832 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 PALMO75781 387 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 CAPNS1P04632 268 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 CHRM1P11229 460 aaPredicted RBP21.85■■□□□ 1.09
SMCO4-201ENST00000298966 ADH5P11766 374 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 PPP3CCP48454 512 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 MESP2Q0VG99 397 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 SCAPQ12770 1279 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 RHBDF2Q6PJF5 856 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 PDZD3Q86UT5 571 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 DEFB119Q8N690 84 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 C12orf29Q8N999 325 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 LRRC57Q8N9N7 239 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 MYLPFQ96A32 169 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 UBXN6Q9BZV1 441 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 FAM49BQ9NUQ9 324 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 SMPD4Q9NXE4 827 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 CDC23Q9UJX2 597 aa21.85■■□□□ 1.09
SMCO4-201ENST00000298966 ARHGAP33O14559 1287 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 SCAMP3O14828 347 aaKnown RBP21.84■■□□□ 1.09
SMCO4-201ENST00000298966 SYPP08247 313 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 CD59P13987 128 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 TCP1P17987 556 aaKnown RBP21.84■■□□□ 1.09
SMCO4-201ENST00000298966 BDNFP23560 247 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 RRM1P23921 792 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 SCNN1AP37088 669 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 RPL34P49207 117 aaKnown RBP21.84■■□□□ 1.09
SMCO4-201ENST00000298966 USP46P62068 366 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 ZNF33AQ06730 810 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 DNAJC24Q6P3W2 148 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 TRMT11Q7Z4G4 463 aaKnown RBP21.84■■□□□ 1.09
SMCO4-201ENST00000298966 C12orf40Q86WS4 652 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 DNAAF5Q86Y56 855 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 SLC35F5Q8WV83 523 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 TTLL2Q9BWV7 592 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 SLC4A5Q9BY07 1137 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 DUSP16Q9BY84 665 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 RNF38Q9H0F5 515 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms