RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 NDRG1Q92597 394 aaKnown RBP6.86□□□□□ -1.31
TMC1-201ENST00000297784 BADQ92934 168 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 TRIM11Q96F44 468 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 TUBGCP5Q96RT8 1024 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 CSNK1G1Q9HCP0 422 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 NINJ2Q9NZG7 142 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 CDH9Q9ULB4 789 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 PCDHB8Q9UN66 801 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 ATP6V1G1O75348 118 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 VAV1P15498 845 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 TYMPP19971 482 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 FGFR3P22607 806 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 IVDP26440 423 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 MAN1A1P33908 653 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 CLCN2P51788 898 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 TAS2R40P59535 323 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 DSG1Q02413 1049 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 BST2Q10589 180 aaKnown RBP6.86□□□□□ -1.31
TMC1-201ENST00000297784 DNAJC3Q13217 504 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 PTK6Q13882 451 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 STILQ15468 1287 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 INTS6LQ5JSJ4 861 aaKnown RBP6.86□□□□□ -1.31
TMC1-201ENST00000297784 TXNRD3NBQ6F5E7 133 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 ACAD11Q709F0 780 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 ADGRG6Q86SQ4 1221 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 TRABD2AQ86V40 505 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 CCDC25Q86WR0 208 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 SRRM1Q8IYB3 904 aaKnown RBP6.86□□□□□ -1.31
TMC1-201ENST00000297784 ABI1Q8IZP0 508 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 ARHGAP24Q8N264 748 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 GBF1Q92538 1859 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 STMN2Q93045 179 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 SNF8Q96H20 258 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 NSL1Q96IY1 281 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 ECSITQ9BQ95 431 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 SSU72Q9NP77 194 aaKnown RBP6.86□□□□□ -1.31
TMC1-201ENST00000297784 PTTG2Q9NZH5 202 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 SSX2IPQ9Y2D8 614 aa6.86□□□□□ -1.31
TMC1-201ENST00000297784 TMEM221A6NGB7 291 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 TMEM110-MUSTN1A8MSY1 372 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 MAGEC1O60732 1142 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 TADA2AO75478 443 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 PROSCO94903 275 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 UBTFL6P0CB48 400 aaPredicted RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 KRT3P12035 628 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 NPR3P17342 541 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 TFE3P19532 575 aaPredicted RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 CHKAP35790 457 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 MAP3K7CLP57077 242 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 YWHAHQ04917 246 aaPredicted RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 ADCY1Q08828 1119 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 RASA2Q15283 850 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 KYNUQ16719 465 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 RAB41Q5JT25 222 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 VARS2Q5ST30 1063 aaKnown RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 FAM117BQ6P1L5 589 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 KLC3Q6P597 504 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 CYP4V2Q6ZWL3 525 aaPredicted RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 BHLHA9Q7RTU4 235 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 PIGZQ86VD9 579 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 TMEM199Q8N511 208 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 SPATA18Q8TC71 538 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 TTC25Q96NG3 672 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 FAM193BQ96PV7 902 aaPredicted RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 FOXP3Q9BZS1 431 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 GPAMQ9HCL2 828 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 IL23AQ9NPF7 189 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 WDR37Q9Y2I8 494 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.85□□□□□ -1.31
TMC1-201ENST00000297784 RASA4BC9J798 803 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 GOLGA8SH3BPF8 625 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 XPO1O14980 1071 aaKnown RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 RASA4O43374 803 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 AP1G1O43747 822 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 GRAP2O75791 330 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 GAS8O95995 478 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 BCAT1P54687 386 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 HPCAP84074 193 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 ATP13A4Q4VNC1 1196 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 FAM171A1Q5VUB5 890 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 FYB2Q5VWT5 728 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 PPP1R2P3Q6NXS1 205 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.85□□□□□ -1.31
TMC1-201ENST00000297784 PIP4K2CQ8TBX8 421 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 MYLPFQ96A32 169 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 CATSPER2Q96P56 530 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 SMC6Q96SB8 1091 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 TMEM175Q9BSA9 504 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 HERPUD2Q9BSE4 406 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 C11orf84Q9BUA3 381 aaPredicted RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 CRISPLD1Q9H336 500 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 PPCSQ9HAB8 311 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 MRPL47Q9HD33 250 aaKnown RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 METTL5Q9NRN9 209 aaKnown RBP6.85□□□□□ -1.31
TMC1-201ENST00000297784 DSEQ9UL01 958 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 STRIP2Q9ULQ0 834 aa6.85□□□□□ -1.31
TMC1-201ENST00000297784 C2CD4BA6NLJ0 364 aa6.84□□□□□ -1.31
TMC1-201ENST00000297784 HOXA2O43364 376 aa6.84□□□□□ -1.31
TMC1-201ENST00000297784 HAUS5O94927 633 aa6.84□□□□□ -1.31
TMC1-201ENST00000297784 FYNP06241 537 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms