RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 PADI4Q9UM07 663 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 UGT2B11O75310 529 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CFL1P23528 166 aaKnown RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MYL9P24844 172 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 FAM187BQ17R55 369 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 TIGD4Q8IY51 512 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 DEFB107AQ8IZN7 70 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CABLES1Q8TDN4 633 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CHAC2Q8WUX2 184 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 TNFAIP8L1Q8WVP5 186 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 C7orf26Q96N11 449 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MED15Q96RN5 788 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 UBE2TQ9NPD8 197 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 NRBP2Q9NSY0 501 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 EXD2Q9NVH0 621 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CMTM6Q9NX76 183 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CHPF2Q9P2E5 772 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MLH3Q9UHC1 1453 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 YTHDC2Q9H6S0 1430 aaKnown RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 A0A1B0GVC2 190 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PSAPP07602 524 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 STAT3P40763 770 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PTENP60484 403 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PAMR1Q6UXH9 720 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 EMC1Q8N766 993 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 VMP1Q96GC9 406 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MCCC1Q96RQ3 725 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PDCD11Q14690 1871 aaKnown RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ADGRL2O95490 1459 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MYO1GB0I1T2 1018 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MCIDASD6RGH6 385 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 INO80B-WBP1J3KQ70 363 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 SCAMP1O15126 338 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 RGS10O43665 173 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PSMB9P28065 219 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 IREB2P48200 963 aaKnown RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 RGS6P49758 472 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PABPC4Q13310 644 aaKnown RBP eCLIP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ULK3Q6PHR2 472 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 DGKHQ86XP1 1220 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ATAD1Q8NBU5 361 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 OR5T2Q8NGG2 359 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PIH1D2Q8WWB5 315 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 REPS1Q96D71 796 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 IFT43Q96FT9 208 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PHF20Q9BVI0 1012 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CCDC106Q9BWC9 280 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ATXN3LQ9H3M9 355 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 TMEM138Q9NPI0 162 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 HMGXB4Q9UGU5 601 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 NDUFAF1Q9Y375 327 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PLCH2O75038 1416 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ATP6V1G2-DDX39BF2Z307 99 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 F6X3S4 739 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 TRAFD1O14545 582 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 RIMBP2O15034 1052 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 RGS14O43566 566 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MED24O75448 989 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 TPPPO94811 219 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ITGAVP06756 1048 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 AGTR1P30556 359 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MNDAP41218 407 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CDH11P55287 796 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CDC42P60953 191 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 KCNMA1Q12791 1236 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 DSG2Q14126 1118 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ANKRD40Q6AI12 368 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 SYTL1Q8IYJ3 562 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 SPATA18Q8TC71 538 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 HEXDCQ8WVB3 486 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 EEF1AKMT1Q8WVE0 214 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 OXNAD1Q96HP4 312 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 SLC4A9Q96Q91 983 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 FAM49BQ9NUQ9 324 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 SIX4Q9UIU6 781 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 HAO1Q9UJM8 370 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 A2ML1A8K2U0 1454 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 GBF1Q92538 1859 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 RUSC2Q8N2Y8 1516 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CHL1O00533 1208 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MAP2K7O14733 419 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 TPBGLP0DKB5 382 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PRDX6P30041 224 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 POLD2P49005 469 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF181Q2M3W8 571 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 EAPPQ56P03 285 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 NUDT18Q6ZVK8 323 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 KANSL1Q7Z3B3 1105 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 LNX2Q8N448 690 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 LRRC1Q9BTT6 524 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 JPH1Q9HDC5 661 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 SDR42E2A6NKP2 422 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 VAPBO95292 243 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CHRNGP07510 517 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 LYNP07948 512 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 NFIL3Q16649 462 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 USP43Q70EL4 1123 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 KATNAL2Q8IYT4 538 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 GPD1LQ8N335 351 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms