RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 GP5P40197 560 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 HDAC4P56524 1084 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 TEDDM1Q5T9Z0 273 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 BHLHE22Q8NFJ8 381 aaPredicted RBP12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 PHF12Q96QT6 1004 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 ZNF180Q9UJW8 692 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 KLF11O14901 512 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 CILPO75339 1184 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 CCDC130P13994 396 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 PTPRAP18433 802 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 NUMBP49757 651 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 SH3BGRP55822 239 aaPredicted RBP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 SLC6A3Q01959 620 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 KLF10Q13118 480 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 CYLC2Q14093 348 aaPredicted RBP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 CYP2R1Q6VVX0 501 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 SIX6OS1Q8N1H7 587 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 PCDH20Q8N6Y1 951 aaKnown RBP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 NAT14Q8WUY8 206 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 RCN3Q96D15 328 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 SIGLEC10Q96LC7 697 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 CCT7Q99832 543 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 OXCT2Q9BYC2 517 aaPredicted RBP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 MINDY3Q9H8M7 445 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 IL1RL2Q9HB29 575 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 CYP4F12Q9HCS2 524 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 SNX15Q9NRS6 342 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 COPG2Q9UBF2 871 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 LZTS1Q9Y250 596 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 HES2Q9Y543 173 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 HNRNPCP07910 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 THRAP10827 490 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 PPM1LQ5SGD2 360 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 RYBPQ8N488 228 aaPredicted RBP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 TMEM174Q8WUU8 243 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 UBE2OQ9C0C9 1292 aaKnown RBP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 GPAMQ9HCL2 828 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 LMCD1Q9NZU5 365 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 KLK14Q9P0G3 267 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 SNX13Q9Y5W8 968 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 CAPN14A8MX76 684 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 TRIM13O60858 407 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 FARP2O94887 1054 aaPredicted RBP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 PIGNO95427 931 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 MPSTP25325 297 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 GMPSP49915 693 aaPredicted RBP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 TNFAIP2Q03169 654 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 ANKRD20A4Q4UJ75 823 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 C6orf52Q5T4I8 152 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 TMEM198Q66K66 360 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 RWDD4Q6NW29 188 aaKnown RBP12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 AAGABQ6PD74 315 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 C16orf89Q6UX73 402 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 CATSPER4Q7RTX7 472 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 FBXW8Q8N3Y1 598 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 PQLC3Q8N755 202 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 DCUN1D1Q96GG9 259 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 ARHGEF4Q9NR80 690 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 SIX4Q9UIU6 781 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 ZNF711Q9Y462 761 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 AP4B1Q9Y6B7 739 aa12.89□□□□□ -0.35
TMEM200A-201ENST00000296978 SETSIPP0DME0 302 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 PRPSAP1Q14558 356 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 SLC9B1Q4ZJI4 515 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 LRRC8EQ6NSJ5 796 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 METTL7BQ6UX53 244 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 PQLC1Q8N2U9 271 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 FAM81AQ8TBF8 368 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 OMDQ99983 421 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 SIK2Q9H0K1 926 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 VPS33BQ9H267 617 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 AURKCQ9UQB9 309 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 COMMD3-BMI1R4GMX3 469 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 STX16-NPEPL1H3BU86 382 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 M0QYT0 321 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 PIGRP01833 764 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 CNTFP26441 200 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 CRABP2P29373 138 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 FDFT1P37268 417 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 CERS2Q96G23 380 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 PRMT7Q9NVM4 692 aaPredicted RBP12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 RUVBL2Q9Y230 463 aaKnown RBP12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 ARHGAP10A1A4S6 786 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 HCRTO43612 131 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 CHRNGP07510 517 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 ITGAXP20702 1163 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 PRKCHP24723 683 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 CCR10P46092 362 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 NME5P56597 212 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 MPP3Q13368 585 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
TMEM200A-201ENST00000296978 SNX31Q8N9S9 440 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms